RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PTK6Q13882 451 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 SEPT6Q14141 434 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 PUM1Q14671 1186 aaKnown RBP eCLIP20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 ATP13A5Q4VNC0 1218 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 PRRT3Q5FWE3 981 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 PDPK2PQ6A1A2 396 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 DOK6Q6PKX4 331 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 FAM151BQ6UXP7 276 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF534Q76KX8 674 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF548Q8NEK5 533 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 DEFB124Q8NES8 71 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 SPATA4Q8NEY3 305 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 RHBDD1Q8TEB9 315 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 GLYATL1Q969I3 302 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 DNAJC1Q96KC8 554 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 CLPBQ9H078 707 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 UGT1A7Q9HAW7 530 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 UGT1A10Q9HAW8 530 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 UGT1A8Q9HAW9 530 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 CYP4F12Q9HCS2 524 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 ARFGAP3Q9NP61 516 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 APOBEC3BQ9UH17 382 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 MOSPD1Q9UJG1 213 aa20.13■□□□□ 0.81
TSPAN3-207ENST00000559494 GLYATL1P3A0A0U1RQE8 302 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 PRSS38A1L453 326 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 CCL22O00626 93 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 TUBB4AP04350 444 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 CSRP1P21291 193 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 PSMA3P25788 255 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 GRK6P43250 576 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 ID4P47928 161 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 BLKP51451 505 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 SESN2P58004 480 aaPredicted RBP20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 XIAPP98170 497 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF648Q5T619 568 aaPredicted RBP20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 EID2Q8N6I1 236 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 LMX1AQ8TE12 382 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 STYXQ8WUJ0 223 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF592Q92610 1267 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 SCARF2Q96GP6 870 aaPredicted RBP20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 RUNDC3BQ96NL0 473 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 KRT12Q99456 494 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 C19orf43Q9BQ61 176 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 LRRC61Q9BV99 259 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 SLC13A1Q9BZW2 595 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 SPASTQ9UBP0 616 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 CDC23Q9UJX2 597 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 PCOLCE2Q9UKZ9 415 aa20.12■□□□□ 0.81
TSPAN3-207ENST00000559494 CCDC78A2IDD5 438 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 GPR39O43194 453 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 AQP9O43315 295 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 URI1O94763 535 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 TMEM63AO94886 807 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 SLC25A14O95258 325 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 ASMTLO95671 621 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 IVLP07476 585 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 CELA2BP08218 269 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 ADRA1DP25100 572 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 IVDP26440 423 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 ADCY8P40145 1251 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 NPY2RP49146 381 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 DR1Q01658 176 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 PEX6Q13608 980 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 MICALCLQ6ZW33 695 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF398Q8TD17 642 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 TBATAQ96M53 351 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 VPS35Q96QK1 796 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 RANBP9Q96S59 729 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 CARS2Q9HA77 564 aaKnown RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 NLE1Q9NVX2 485 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 SUFUQ9UMX1 484 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 CSNK1G3Q9Y6M4 447 aa20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 ARHGEF17Q96PE2 2063 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-207ENST00000559494 KIF2AO00139 706 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 TRIM38O00635 465 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 GIPC1O14908 333 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 TTI1O43156 1089 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 CTSEP14091 401 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 HADHAP40939 763 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 TCEA2Q15560 299 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 KHDC1Q4VXA5 237 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 SYDE1Q6ZW31 735 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 MARK2Q7KZI7 788 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 CAND1Q86VP6 1230 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 JAMLQ86YT9 394 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 NAT8LQ8N9F0 302 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 MCUQ8NE86 351 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 BAHD1Q8TBE0 780 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 CDKN2AIPNLQ96HQ2 116 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 ZNF778Q96MU6 729 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 TMEM168Q9H0V1 697 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 SUDS3Q9H7L9 328 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 TRIM39Q9HCM9 518 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 ATXN10Q9UBB4 475 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 ASIC3Q9UHC3 531 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 APPL1Q9UKG1 709 aa20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 PCYT1BQ9Y5K3 369 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-207ENST00000559494 BPTFQ12830 3046 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms