RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CCDC28AQ8IWP9 274 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 BOLLQ8N9W6 283 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SLC35C1Q96A29 364 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MAT2BQ9NZL9 334 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TBC1D30Q9Y2I9 924 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHB3Q9Y5E6 796 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 OR2AT4A6NND4 320 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GPR182O15218 404 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DLX3O60479 287 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PRH1P02810 166 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ENDOUP21128 410 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 OR10T2Q8NGX3 314 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 HAS1Q92839 578 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ADAD1Q96M93 576 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DDIT4Q9NX09 232 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PPEF1O14829 653 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 WEE1P30291 646 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 DSG3P32926 999 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 GALNT3Q14435 633 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ATF7IP2Q5U623 682 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 MMAAQ8IVH4 418 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 C1orf216Q8TAB5 229 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZFP90Q8TF47 636 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NIF3L1Q9GZT8 377 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TM9SF3Q9HD45 589 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 TJP2Q9UDY2 1190 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 NDUFB10O96000 172 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 PELOQ9BRX2 385 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF436Q9C0F3 470 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 SCUBE2Q9NQ36 999 aa3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CNOT6Q9ULM6 557 aaKnown RBP3.68□□□□□ -1.82
ATXN3-248ENST00000558190 CECR2Q9BXF3 1484 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 FADS2P1A8MWK0 482 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 UFM1P61960 85 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 LAPTM5Q13571 262 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 KCNA10Q16322 511 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RANBP9Q96S59 729 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 TDRD3Q9H7E2 651 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RFPL3O75679 317 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 OR3A3P47888 321 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CYP4F8P98187 520 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PPP1R8Q12972 351 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 GPRC6AQ5T6X5 926 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 BEND5Q7L4P6 421 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 KBTBD6Q86V97 674 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 FLT1P17948 1338 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 H7C1Q1 480 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ALX3O95076 343 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 NR2F1P10589 423 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 NDUFA6P56556 154 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RIPPLY1Q0D2K3 151 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 BORAQ6PGQ7 559 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 LILRB4Q8NHJ6 448 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 JPH3Q8WXH2 748 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 MOCOSQ96EN8 888 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 IRAK3Q9Y616 596 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PDCD5O14737 125 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 EMC2Q15006 297 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CBWD6Q4V339 395 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CBWD3Q5JTY5 395 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CBWD5Q5RIA9 395 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF655Q8N720 491 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 OR6Q1Q8NGQ2 317 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 MFSD14AQ96MC6 490 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 NYAP2Q9P242 653 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 MAFFQ9ULX9 164 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 MICAL2O94851 1124 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 JUNDP17535 347 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM179Q6ZVK1 233 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RAVER1Q8IY67 606 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SVOPLQ8N434 492 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 THAP6Q8TBB0 222 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SLC47A1Q96FL8 570 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ZDHHC2Q9UIJ5 367 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 USP42Q9H9J4 1324 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PCDH17O14917 1159 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 DGAT1O75907 488 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 COX7A2P14406 83 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RBM34P42696 430 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 EXOC2Q96KP1 924 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 UGT2A1Q9Y4X1 527 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ST3GAL4Q11206 333 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ZNF773Q6PK81 442 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PDZD9Q8IXQ8 264 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PURBQ96QR8 312 aaKnown RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 ACE2Q9BYF1 805 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-248ENST00000558190 XKR8Q9H6D3 395 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 HCN4Q9Y3Q4 1203 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SLC30A4O14863 429 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SLC22A1O15245 554 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 SLC37A4O43826 429 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 H2AFB2P0C5Z0 115 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 CKMT1AP12532 417 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 PRAMEF18Q5VWM3 479 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 IGFN1Q86VF2 1251 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 NT5MQ9NPB1 228 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 RPS6KB2Q9UBS0 482 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 TISP43B9A030 160 aa3.67□□□□□ -1.82
ATXN3-248ENST00000558190 DHX15O43143 795 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms