RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 P2RY12Q9H244 342 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 MTIF3Q9H2K0 278 aaKnown RBP8.53□□□□□ -1.04
NEMF-215ENST00000557380 GSTO2Q9H4Y5 243 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 DENND2DQ9H6A0 471 aaPredicted RBP8.53□□□□□ -1.04
NEMF-215ENST00000557380 MAN1C1Q9NR34 630 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 DPP7Q9UHL4 492 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 EVLQ9UI08 416 aaPredicted RBP8.53□□□□□ -1.04
NEMF-215ENST00000557380 ZNF106Q9H2Y7 1883 aaKnown RBP8.53□□□□□ -1.04
NEMF-215ENST00000557380 ALPK3Q96L96 1907 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 NOTCH4Q99466 2003 aa8.53□□□□□ -1.04
NEMF-215ENST00000557380 TRBV5-4A0A0C4DH59 114 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 UBA6A0AVT1 1052 aaPredicted RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 LINC01553A4QN01 128 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 SYCE1LA8MT33 242 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 KLK8O60259 260 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 TM7SF2O76062 418 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 RHOP08100 348 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 FGF4P08620 206 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PRSS56P0CW18 603 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 SRCP12931 536 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 MTHFD2P13995 350 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 NCF2P19878 526 aaPredicted RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 WEE1P30291 646 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 HLA-FP30511 346 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PGM1P36871 562 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 CCR10P46092 362 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 KCNC1P48547 511 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 KDSRQ06136 332 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 KLF10Q13118 480 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 HERC3Q15034 1050 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 TEAD2Q15562 447 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 ZNF77Q15935 545 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 LSM12Q3MHD2 195 aaKnown RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 UNC50Q53HI1 259 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 ZRANB3Q5FWF4 1079 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PRSS36Q5K4E3 855 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 DGKKQ5KSL6 1271 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PAQR3Q6TCH7 311 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 LYSMD3Q7Z3D4 306 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 RAB44Q7Z6P3 723 aaPredicted RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 KIAA0907Q7Z7F0 614 aaPredicted RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 CUZD1Q86UP6 607 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PCDH20Q8N6Y1 951 aaKnown RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 AGAP11Q8TF27 550 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 VOPP1Q96AW1 172 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 EID2BQ96D98 161 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PDLIM5Q96HC4 596 aaKnown RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 ZNF641Q96N77 438 aaPredicted RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 SMIM14Q96QK8 99 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 TTC1Q99614 292 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 C1QTNF3Q9BXJ4 246 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 SLC2A11Q9BYW1 496 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 TM6SF2Q9BZW4 377 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 UNKQ9C0B0 810 aaKnown RBP8.52□□□□□ -1.05
NEMF-215ENST00000557380 MEAF6Q9HAF1 191 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 RNPEPL1Q9HAU8 725 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 ZFYVE1Q9HBF4 777 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 HCFC1R1Q9NWW0 138 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 ZDHHC7Q9NXF8 308 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 PLK2Q9NYY3 685 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 APPL1Q9UKG1 709 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 SLC30A1Q9Y6M5 507 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 SCN8AQ9UQD0 1980 aa8.52□□□□□ -1.05
NEMF-215ENST00000557380 WASH3PC4AMC7 463 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 E9PBE3 544 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 H3BMM5 538 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 STX16-NPEPL1H3BU86 382 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 SDHDO14521 159 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 GAPDHSO14556 408 aaPredicted RBP8.51□□□□□ -1.05
NEMF-215ENST00000557380 STX16O14662 325 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 ZNF197O14709 1029 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 PRMT5O14744 637 aaPredicted RBP8.51□□□□□ -1.05
NEMF-215ENST00000557380 DCXO43602 365 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 KLHL41O60662 606 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CLASP2O75122 1294 aaKnown RBP8.51□□□□□ -1.05
NEMF-215ENST00000557380 PEX11AO75192 247 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 PAPLNO95428 1278 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 PRAMEF12O95522 483 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 TSPAN12O95859 305 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 THRAP10827 490 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CPA2P48052 419 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CDKN1CP49918 316 aaPredicted RBP8.51□□□□□ -1.05
NEMF-215ENST00000557380 LBX1P52954 281 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 OR4D1Q15615 310 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 MYLK3Q32MK0 819 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 FUT11Q495W5 492 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CTSL3PQ5NE16 218 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 C22orf39Q6P5X5 142 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 ELMSAN1Q6PJG2 1045 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 TXNDC11Q6PKC3 985 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 SNX20Q7Z614 316 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 NET1Q7Z628 596 aaPredicted RBP8.51□□□□□ -1.05
NEMF-215ENST00000557380 TMEM25Q86YD3 366 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 SCUBE1Q8IWY4 988 aa8.51□□□□□ -1.05
NEMF-215ENST00000557380 CEP70Q8NHQ1 597 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms