RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ADCY8P40145 1251 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ACTR1BP42025 376 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ACTR1AP61163 376 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 INSM1Q01101 510 aaPredicted RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ITGA9Q13797 1035 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 SPIDRQ14159 915 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 RBM44Q6ZP01 1051 aaKnown RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 PELI3Q8N2H9 469 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 FAM71DQ8N9W8 422 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 KYQ8NBH2 561 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 CCDC110Q8TBZ0 833 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 BRSK1Q8TDC3 778 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 GPBAR1Q8TDU6 330 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
VPS33B-206ENST00000557358 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 FICDQ9BVA6 458 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 KCND1Q9NSA2 647 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ZNF148Q9UQR1 794 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 TMEM98Q9Y2Y6 226 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 AK5Q9Y6K8 562 aa13.71□□□□□ -0.21
VPS33B-206ENST00000557358 ASXL3Q9C0F0 2248 aa13.71□□□□□ -0.22
VPS33B-206ENST00000557358 RP1P56715 2156 aa13.71□□□□□ -0.22
VPS33B-206ENST00000557358 A0A0U1RQJ8 604 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TRABD2BA6NFA1 517 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 RHPN2P1A8MT19 583 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 SOD1P00441 154 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 MYF5P13349 255 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 GLB1P16278 677 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 VCLP18206 1134 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 SPAM1P38567 509 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 POLD2P49005 469 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 LMAN1P49257 510 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 PPM1FP49593 454 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-206ENST00000557358 KLF1Q13351 362 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-206ENST00000557358 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 MEI1Q5TIA1 1274 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 SLC30A9Q6PML9 568 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TRIM74Q86UV6 250 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 SLC13A5Q86YT5 568 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-206ENST00000557358 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 CCDC89Q8N998 374 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-206ENST00000557358 AVL9Q8NBF6 648 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 GLYATL1Q969I3 302 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 COX14Q96I36 57 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 AGAP2Q99490 1192 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TBL1YQ9BQ87 522 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 CCDC3Q9BQI4 270 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 NRSN2Q9GZP1 204 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 LRRC40Q9H9A6 602 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TRIM39Q9HCM9 518 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TRMT1Q9NXH9 659 aaKnown RBP13.7□□□□□ -0.22
VPS33B-206ENST00000557358 TAAR2Q9P1P5 351 aa13.7□□□□□ -0.22
VPS33B-206ENST00000557358 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 E7EVH7 732 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 NUDT21O43809 227 aaKnown RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 VEGFDO43915 354 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 PNLIPP16233 465 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 BPIP17213 487 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 LPOP22079 712 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 CTBSQ01459 385 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 PYCR3Q53H96 274 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 OGFOD3Q6PK18 319 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 LINC00523Q86TU6 105 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 DCBLD1Q8N8Z6 715 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 GPR156Q8NFN8 814 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 CCDC74AQ96AQ1 378 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 HERPUD2Q9BSE4 406 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 STRADBQ9C0K7 418 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 BPIFA1Q9NP55 256 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 HOMER3Q9NSC5 361 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
VPS33B-206ENST00000557358 MAP1BP46821 2468 aaKnown RBP13.69□□□□□ -0.22
VPS33B-206ENST00000557358 MYLKQ15746 1914 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 ACACAQ13085 2346 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 LY6G6EA0A0G2JKS1 128 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 GLYATL1P3A0A0U1RQE8 302 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 FADS2P1A8MWK0 482 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 GRID2O43424 1007 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CSO75390 466 aaKnown RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 AGTP01019 485 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 IFNB1P01574 187 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 FDFT1P37268 417 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 HADHAP40939 763 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CHRNA4P43681 627 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms