RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 SLC25A14O95258 325 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-209ENST00000557342 AP2A1O95782 977 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 IFNB1P01574 187 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 CELA2BP08218 269 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 LPOP22079 712 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-209ENST00000557342 POLD2P49005 469 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 NYAP1Q6ZVC0 841 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 TMPRSS7Q7RTY8 843 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 PHYKPLQ8IUZ5 450 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 OR6C4Q8NGE1 309 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GPBAR1Q8TDU6 330 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 NAT6Q93015 286 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 C19orf43Q9BQ61 176 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 APOL2Q9BQE5 337 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 TRIM39Q9HCM9 518 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 TMEM98Q9Y2Y6 226 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
SLIRP-209ENST00000557342 GOLGA4Q13439 2230 aaKnown RBP12.39□□□□□ -0.43
SLIRP-209ENST00000557342 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 E7EVH7 732 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 CES2O00748 559 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 USP12O75317 370 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 TOP3BO95985 862 aaKnown RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 GAS8O95995 478 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 FUCA1P04066 466 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 ADCY8P40145 1251 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 LMAN1P49257 510 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 ITGA9Q13797 1035 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 LRP8Q14114 963 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 TCEA2Q15560 299 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 SMAD1Q15797 465 aaKnown RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 OAS3Q9Y6K5 1087 aaKnown RBP12.38□□□□□ -0.43
SLIRP-209ENST00000557342 U3KQA8 63 aa12.38□□□□□ -0.43
SLIRP-209ENST00000557342 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 VEGFDO43915 354 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 NUAK1O60285 661 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 DNAJC6O75061 913 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 HADHAP40939 763 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 CTBSQ01459 385 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 OLIG2Q13516 323 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 MARK2Q7KZI7 788 aaKnown RBP12.37□□□□□ -0.43
SLIRP-209ENST00000557342 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
SLIRP-209ENST00000557342 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 WDR48Q8TAF3 677 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 DPEP2Q9H4A9 486 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 ZNHIT2Q9UHR6 403 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 APPL1Q9UKG1 709 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
SLIRP-209ENST00000557342 SPTBN2O15020 2390 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 USP27XA6NNY8 438 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
SLIRP-209ENST00000557342 GRID2O43424 1007 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 BUD23O43709 281 aaKnown RBP12.36□□□□□ -0.43
SLIRP-209ENST00000557342 SUN1O94901 812 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 MYF5P13349 255 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 ETS1P14921 441 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 JUPP14923 745 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 SPINK2P20155 84 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 CDH17Q12864 832 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 MSLNQ13421 630 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-209ENST00000557342 SEMA5AQ13591 1074 aa12.36□□□□□ -0.43
SLIRP-209ENST00000557342 LAMB3Q13751 1172 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms