RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 EFHD1Q9BUP0 239 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 MSL2Q9HCI7 577 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 FAM49BQ9NUQ9 324 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 AKAP7Q9P0M2 348 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-223ENST00000557076 SFMBT1Q9UHJ3 866 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 NAALADL1Q9UQQ1 740 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 SLC30A1Q9Y6M5 507 aa4.79□□□□□ -1.64
SCFD1-223ENST00000557076 MYH11P35749 1972 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 DCHS2Q6V1P9 2916 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PLXNA2O75051 1894 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 TYW5A2RUC4 315 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 FAM47E-STBD1D6RA91 191 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 MKRN2OSH3BPM6 223 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 K7EM74 188 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 TOR1BO14657 336 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 FPGTO14772 594 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 EIF3DO15371 548 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PCDH8O95206 1070 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 KIF20AO95235 890 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 IGLV3-27P01718 113 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 RPLP0P05388 317 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 COL6A2P12110 1019 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CCL4P13236 92 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PRF1P14222 555 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 IDEP14735 1019 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 TSHRP16473 764 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ZNF18P17022 549 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 HOXD13P35453 343 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ETFBP38117 255 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 TKTL1P51854 596 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 MAPK10P53779 464 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PFN3P60673 137 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 GPR85P60893 370 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 RPS24P62847 133 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 RPS21P63220 83 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 INCA1Q0VD86 236 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CDH18Q13634 790 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 DLG2Q15700 870 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 EIF2S3LQ2VIR3 472 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 DEFB109BQ30KR1 87 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 OR6B2Q6IFH4 312 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PTAR1Q7Z6K3 402 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 SKAP1Q86WV1 359 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CCDC13Q8IYE1 715 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CACNA2D3Q8IZS8 1091 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 APCDD1Q8J025 514 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 SCML4Q8N228 414 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 FSTL5Q8N475 847 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CARNMT1Q8N4J0 409 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 FAM184AQ8NB25 1140 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ANKRD52Q8NB46 1076 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 XXYLT1Q8NBI6 393 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 JPH3Q8WXH2 748 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ASB12Q8WXK4 309 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 UBXN4Q92575 508 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ERCC4Q92889 916 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 JAKMIP2Q96AA8 810 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 SCYL1Q96KG9 808 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PPP1R13BQ96KQ4 1090 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 KLF6Q99612 283 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 KCNJ15Q99712 375 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 MYOCQ99972 504 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 AARSD1Q9BTE6 412 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ASPSCR1Q9BZE9 553 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 SLC13A1Q9BZW2 595 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 SPRY4Q9C004 299 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CLPBQ9H078 707 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CYP3A43Q9HB55 503 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 FZD3Q9NPG1 666 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CASS4Q9NQ75 786 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ABCC13Q9NSE7 274 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PANK4Q9NVE7 773 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 HMGXB4Q9UGU5 601 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 OAZ3Q9UMX2 235 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 LIMCH1Q9UPQ0 1083 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 ENTPD4Q9Y227 616 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 TP53TG5Q9Y2B4 290 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 CEP83Q9Y592 693 aa4.78□□□□□ -1.64
SCFD1-223ENST00000557076 YJEFN3A6XGL0 299 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 TCP11X1B4DZS4 312 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 E7ENQ6 273 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 M0QYT0 321 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 IKBKBO14920 756 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 RAD51BO15315 384 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 TGFB1I1O43294 461 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 LUC7L3O95232 432 aaKnown RBP4.77□□□□□ -1.65
SCFD1-223ENST00000557076 VNN1O95497 513 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 BMP15O95972 392 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 ASS1P00966 412 aaKnown RBP4.77□□□□□ -1.65
SCFD1-223ENST00000557076 ALPIP09923 528 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 FGF3P11487 239 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-223ENST00000557076 CHRNA3P32297 505 aa4.77□□□□□ -1.65
SCFD1-223ENST00000557076 LEPRP48357 1165 aaKnown RBP4.77□□□□□ -1.65
SCFD1-223ENST00000557076 STK19P49842 368 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms