RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SHEQ5VZ18 495 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 OVOS1Q6IE37 1185 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 CCDC28AQ8IWP9 274 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 PHC2Q8IXK0 858 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 CCNYQ8ND76 341 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 RIN3Q8TB24 985 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 USP13Q92995 863 aaPredicted RBP5.09□□□□□ -1.6
TMEM260-210ENST00000556422 HHIPL1Q96JK4 782 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 EXOC2Q96KP1 924 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 TBC1D10AQ9BXI6 508 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 ZCCHC2Q9C0B9 1178 aaKnown RBP5.09□□□□□ -1.6
TMEM260-210ENST00000556422 KCNK13Q9HB14 408 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 POLR3BQ9NW08 1133 aaPredicted RBP5.09□□□□□ -1.6
TMEM260-210ENST00000556422 SYBUQ9NX95 663 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 SIRPGQ9P1W8 387 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 HECAQ9UBI9 543 aaPredicted RBP5.09□□□□□ -1.6
TMEM260-210ENST00000556422 PPARGC1AQ9UBK2 798 aaKnown RBP5.09□□□□□ -1.6
TMEM260-210ENST00000556422 TRHDEQ9UKU6 1024 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 LRFN2Q9ULH4 789 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 MAPRE3Q9UPY8 281 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 GPSM3Q9Y4H4 160 aa5.09□□□□□ -1.6
TMEM260-210ENST00000556422 TRAV20A0A0B4J274 112 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 BTN3A1O00481 513 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PFDN6O15212 129 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 AOC2O75106 756 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 USP12O75317 370 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ATP5F1P24539 256 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TTKP33981 857 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 GARSP41250 739 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SLC5A3P53794 718 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ATN1P54259 1190 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 NAA20P61599 178 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 NFKB2Q00653 900 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 LIPEQ05469 1076 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 GALNT3Q14435 633 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PARP6Q2NL67 630 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 C1orf185Q5T7R7 199 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MANEALQ5VSG8 457 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ARMC6Q6NXE6 501 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MARK2Q7KZI7 788 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SCD5Q86SK9 330 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CHERPQ8IWX8 916 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 GANCQ8TET4 914 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 FCRL3Q96P31 734 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MECRQ9BV79 373 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TGIF2Q9GZN2 237 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MYLK2Q9H1R3 596 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 WDCPQ9H6R7 721 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 RGS18Q9NS28 235 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 FAIMQ9NVQ4 179 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 OSER1Q9NX31 292 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 KLHL14Q9P2G3 628 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PLLPQ9Y342 182 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PRSS44E7EML9 344 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ZBTB24O43167 697 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 IRAK2O43187 625 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CAPNS1P04632 268 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PRKCGP05129 697 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 KRT8P05787 483 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 T-ENOLP0DO92 83 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 RPS2P15880 293 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SLC26A3P40879 764 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 RAP1GDS1P52306 607 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ATXN3P54252 364 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SESN2P58004 480 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 FCHO2Q0JRZ9 810 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 OVGP1Q12889 678 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 GPNMBQ14956 572 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CRTC2Q53ET0 693 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MROH9Q5TGP6 573 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 KLHDC8BQ8IXV7 354 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CNTD1Q8N815 330 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TSPEARQ8WU66 669 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TMIGD2Q96BF3 282 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 PHF12Q96QT6 1004 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 CHCHD6Q9BRQ6 235 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 EMILIN2Q9BXX0 1053 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 C20orf27Q9GZN8 174 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MANSC1Q9H8J5 431 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 NMUR1Q9HB89 426 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ARMC1Q9NVT9 282 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MICAL3Q7RTP6 2002 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SDR42E2A6NKP2 422 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 TAF4O00268 1085 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 MSI1O43347 362 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SOCS5O75159 536 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 KRT37O76014 449 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 UNC5CO95185 931 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 AP2A1O95782 977 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 F7P08709 466 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 DLDP09622 509 aaKnown RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 BGNP21810 368 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 EPHB2P29323 1055 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ELF3P78545 371 aaPredicted RBP5.08□□□□□ -1.6
TMEM260-210ENST00000556422 OCA2Q04671 838 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 ART3Q13508 389 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 SERINC3Q13530 473 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 DEFB115Q30KQ5 88 aa5.08□□□□□ -1.6
TMEM260-210ENST00000556422 HSF5Q4G112 596 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms