RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PYCR3Q53H96 274 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 SLC30A9Q6PML9 568 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 TTC30BQ8N4P2 665 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 CCDC110Q8TBZ0 833 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 SPATA16Q9BXB7 569 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 GSDMCQ9BYG8 508 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 DPEP2Q9H4A9 486 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 ARFGAP3Q9NP61 516 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 TAAR2Q9P1P5 351 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 DKK4Q9UBT3 224 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 GPSM3Q9Y4H4 160 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 CFAP47Q6ZTR5 3102 aa20.35■□□□□ 0.85
VTI1B-205ENST00000555543 CSO75390 466 aaKnown RBP20.34■□□□□ 0.85
VTI1B-205ENST00000555543 KRT37O76014 449 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 ASMTLO95671 621 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 HLTFQ14527 1009 aaKnown RBP eCLIP20.34■□□□□ 0.85
VTI1B-205ENST00000555543 C14orf28Q4W4Y0 310 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 CERCAMQ5T4B2 595 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 ITPRIPL1Q6GPH6 555 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 NXPE2Q96DL1 559 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 SPATA13Q96N96 652 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 DEPDC7Q96QD5 511 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 FICDQ9BVA6 458 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 CDH19Q9H159 772 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 BPIFA1Q9NP55 256 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 VPS18Q9P253 973 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 PRKAB1Q9Y478 270 aa20.34■□□□□ 0.85
VTI1B-205ENST00000555543 ACACAQ13085 2346 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 ITPR1Q14643 2758 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 GOLGA6L9A6NEM1 432 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 DNAJC6O75061 913 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 AGTP01019 485 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 FGF1P05230 155 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 PTMAP06454 111 aaKnown RBP20.33■□□□□ 0.85
VTI1B-205ENST00000555543 HLA-DPA1P20036 260 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 PDX1P52945 283 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 GEMP55040 296 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 MAZP56270 477 aaKnown RBP20.33■□□□□ 0.85
VTI1B-205ENST00000555543 ZNF569Q5MCW4 686 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 ZNF648Q5T619 568 aaPredicted RBP20.33■□□□□ 0.85
VTI1B-205ENST00000555543 GALNT13Q8IUC8 556 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 TRAM1L1Q8N609 369 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 BLOC1S5Q8TDH9 187 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 ZDHHC1Q8WTX9 485 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 PATE1Q8WXA2 126 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 SRPK1Q96SB4 655 aaKnown RBP20.33■□□□□ 0.85
VTI1B-205ENST00000555543 FERMT1Q9BQL6 677 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 FSD1LQ9BXM9 530 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 NRSN2Q9GZP1 204 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 LZTFL1Q9NQ48 299 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 RNF215Q9Y6U7 377 aa20.33■□□□□ 0.85
VTI1B-205ENST00000555543 NTN3O00634 580 aaPredicted RBP20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ANXA9O76027 345 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 STK10O94804 968 aaKnown RBP20.32■□□□□ 0.84
VTI1B-205ENST00000555543 CCDC175P0C221 793 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ADRA1AP35348 466 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 HMGCLP35914 325 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ACTR1BP42025 376 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 TNNT3P45378 269 aaPredicted RBP20.32■□□□□ 0.84
VTI1B-205ENST00000555543 GDF10P55107 478 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ACTR1AP61163 376 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 RTP5Q14D33 572 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ISXQ2M1V0 245 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 C17orf82Q86X59 251 aaPredicted RBP20.32■□□□□ 0.84
VTI1B-205ENST00000555543 TTC13Q8NBP0 860 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 SLC35B2Q8TB61 432 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 APOL2Q9BQE5 337 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 ZSCAN5AQ9BUG6 496 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 TRABDQ9H4I3 376 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 SYNDIG1Q9H7V2 258 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 RAD18Q9NS91 495 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 TMPRSS11EQ9UL52 423 aa20.32■□□□□ 0.84
VTI1B-205ENST00000555543 A0A1W2PQM1 296 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 BUD23O43709 281 aaKnown RBP20.31■□□□□ 0.84
VTI1B-205ENST00000555543 CCL7P80098 99 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 MEI1Q5TIA1 1274 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 RBM44Q6ZP01 1051 aaKnown RBP20.31■□□□□ 0.84
VTI1B-205ENST00000555543 GLT6D1Q7Z4J2 308 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 NAGSQ8N159 534 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 FAM71DQ8N9W8 422 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 ATG4AQ8WYN0 398 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 GLYATL1Q969I3 302 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 PLEKHG4BQ96PX9 1271 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 OR2AG1Q9H205 316 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 IL17CQ9P0M4 197 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 ATXN10Q9UBB4 475 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 ZNHIT2Q9UHR6 403 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 RAXQ9Y2V3 346 aa20.31■□□□□ 0.84
VTI1B-205ENST00000555543 CHD6Q8TD26 2715 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 A0A1W2PNU3 283 aaPredicted RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 C5orf60A6NFR6 353 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 GPR39O43194 453 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 USP12O75317 370 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 TCEA3O75764 348 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 SLC25A14O95258 325 aaPredicted RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 ECEL1O95672 775 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 RPLP0P05388 317 aaKnown RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 GLB1P16278 677 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 ZNF8P17098 575 aaPredicted RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 KHDC1Q4VXA5 237 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms