RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TUBB3Q13509 450 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 CCDC6Q16204 474 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 PCID2Q5JVF3 399 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 TSSK4Q6SA08 328 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 ZCCHC23Q6ZST2 131 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 SCUBE1Q8IWY4 988 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 SORT1Q99523 831 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 TM6SF2Q9BZW4 377 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 ZNF395Q9H8N7 513 aaPredicted RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 MRM3Q9HC36 420 aaKnown RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.37
SHOX-204ENST00000554971 LHX3Q9UBR4 397 aa17.33■□□□□ 0.37
SHOX-204ENST00000554971 A0A096LPK6 155 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 GJB3O75712 270 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 PAPSS2O95340 614 aaPredicted RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 JCHAINP01591 159 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 ACADSP16219 412 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 ATP6V1C1P21283 382 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 NNMTP40261 264 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 RGRP47804 291 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 CXCL12P48061 93 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 CSRP3P50461 194 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 KPNB1Q14974 876 aaKnown RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 ACSBG2Q5FVE4 666 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 RBM15BQ8NDT2 890 aaKnown RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 CMTM5Q96DZ9 223 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 EXOC2Q96KP1 924 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 FAM129BQ96TA1 746 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 IL12RB2Q99665 862 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 C20orf96Q9NUD7 363 aaPredicted RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 PIH1D1Q9NWS0 290 aaKnown RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 MARCOQ9UEW3 520 aaPredicted RBP17.33■□□□□ 0.36
SHOX-204ENST00000554971 DOCK9Q9BZ29 2069 aa17.33■□□□□ 0.36
SHOX-204ENST00000554971 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 ITM2AO43736 263 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 TRIM13O60858 407 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 CCR3P51677 355 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 IRX4P78413 519 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 PPM1JQ5JR12 505 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 SDE2Q6IQ49 451 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 DPY19L3Q6ZPD9 716 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 CNTN4Q8IWV2 1026 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 PGBD5Q8N414 524 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 MDGA1Q8NFP4 955 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 ISG20Q96AZ6 181 aaKnown RBP17.32■□□□□ 0.36
SHOX-204ENST00000554971 NSMCE3Q96MG7 304 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 TSNARE1Q96NA8 513 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 GPR22Q99680 433 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 CEP44Q9C0F1 390 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 RHOJQ9H4E5 214 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 GPAMQ9HCL2 828 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 SLC17A6Q9P2U8 582 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 PLXND1Q9Y4D7 1925 aa17.32■□□□□ 0.36
SHOX-204ENST00000554971 TCRBV21S2A2A0A5A6 115 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 MATN3O15232 486 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CTSLP07711 333 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 PXNP49023 591 aaPredicted RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 IDH3AP50213 366 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 DGKEP52429 567 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ALDH18A1P54886 795 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 GEMP55040 296 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 DMWDQ09019 674 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ILF2Q12905 390 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 LBRQ14739 615 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 HSP90AA5PQ58FG0 334 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CERCAMQ5T4B2 595 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ATXN7L2Q5T6C5 722 aaPredicted RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 TMCO4Q5TGY1 634 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 STK40Q8N2I9 435 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 TEX26Q8N6G2 289 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CHST14Q8NCH0 376 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 OR6K2Q8NGY2 324 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 FATE1Q969F0 183 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 NMRAL1Q9HBL8 299 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 TLK1Q9UKI8 766 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ANGPTL2Q9UKU9 493 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 PRR5-ARHGAP8B1AHC4 643 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ZNF195O14628 629 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 BNIP3LO60238 219 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 TOP3BO95985 862 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 C2P06681 752 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 C7P10643 843 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 GABRG2P18507 467 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 NDUFV2P19404 249 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ARHGAP8P85298 464 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ASPHQ12797 758 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 HNRNPDQ14103 355 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 STARD3Q14849 445 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CES3Q6UWW8 571 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 CACUL1Q86Y37 369 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 LMNTD2Q8IXW0 634 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 PCDH20Q8N6Y1 951 aaKnown RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 PPFIBP2Q8ND30 876 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 GABPB2Q8TAK5 448 aaPredicted RBP17.31■□□□□ 0.36
SHOX-204ENST00000554971 DNAJC9Q8WXX5 260 aa17.31■□□□□ 0.36
SHOX-204ENST00000554971 MFSD3Q96ES6 412 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms