RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TCEAL2Q9H3H9 227 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-229ENST00000554672 ZSCAN16Q9H4T2 348 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-229ENST00000554672 EXOC1Q9NV70 894 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 IL36AQ9UHA7 158 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 APPL1Q9UKG1 709 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 TBC1D30Q9Y2I9 924 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 PCDHGA3Q9Y5H0 932 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 X6R8D5 127 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 CREBBPQ92793 2442 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 COL12A1Q99715 3063 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
ATXN3-229ENST00000554672 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 MYLKQ15746 1914 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 MYO9AB2RTY4 2548 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 K7ERQ8 282 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RNF103O00237 685 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 NEMP1O14524 444 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 NKX2-8O15522 239 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ZW10O43264 779 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SMAD6O43541 496 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 KLRC4O43908 158 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CUTAO60888 179 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 KRT38O76015 456 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RASGRP1O95267 797 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 DDAH2O95865 285 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 IGLV3-25P01717 112 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 NAT2P11245 290 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SYT1P21579 422 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 TBXAS1P24557 533 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ELAVL4P26378 380 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 HOXC12P31275 282 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CCR1P32246 355 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 STAT5AP42229 794 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ACADSBP45954 432 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RPL34P49207 117 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 MXI1P50539 228 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 PEX5P50542 639 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 HK3P52790 923 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CDH4P55283 916 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RPL11P62913 178 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 YWHAZP63104 245 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CDK17Q00537 523 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 EIF4EBP2Q13542 120 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ARHGEF7Q14155 803 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CLPPQ16740 277 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 PRSS53Q2L4Q9 553 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 C5orf22Q49AR2 442 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 LACTB2Q53H82 288 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CARD16Q5EG05 197 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 E4F1Q66K89 784 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RETSATQ6NUM9 610 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SHC4Q6S5L8 630 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 DPY19L3Q6ZPD9 716 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 TAC4Q86UU9 113 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CIR1Q86X95 450 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CEP57L1Q8IYX8 460 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 TEX19Q8NA77 164 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 GPR156Q8NFN8 814 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 OR52K2Q8NGK3 314 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 PCDH19Q8TAB3 1148 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 CLEC4CQ8WTT0 213 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SSC4DQ8WTU2 575 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 APOBEC4Q8WW27 367 aaKnown RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 JPH3Q8WXH2 748 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 TFAP2BQ92481 460 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 FAM149B1Q96BN6 582 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ARHGEF26Q96DR7 871 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 PAGE5Q96GU1 130 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SLC45A3Q96JT2 553 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 MED15Q96RN5 788 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 HEPHQ9BQS7 1158 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SSBP3Q9BWW4 388 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-229ENST00000554672 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 ASPSCR1Q9BZE9 553 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 POPDC2Q9HBU9 364 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SIRPGQ9P1W8 387 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 COQ4Q9Y3A0 265 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 RNF215Q9Y6U7 377 aa4.87□□□□□ -1.63
ATXN3-229ENST00000554672 SPTAN1Q13813 2472 aaKnown RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 C16orf96A6NNT2 1141 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 M0QYV0 167 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 AGRPO00253 132 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 DDX3XO00571 662 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 HGSO14964 777 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 B4GAT1O43505 415 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 SNAP91O60641 907 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ZNF821O75541 412 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TM7SF2O76062 418 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CNTN5O94779 1100 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 ENDOD1O94919 500 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 CPNE6O95741 557 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 TNFP01375 233 aa4.86□□□□□ -1.63
ATXN3-229ENST00000554672 MYL1P05976 194 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms