RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FAM25EA8MYX2 175 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 BCKDKO14874 412 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 IGFBP5P24593 272 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 RAB25P57735 213 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 OTOP3Q7RTS5 596 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 IRGQQ8WZA9 623 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PPCDCQ96CD2 204 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 LRTM1Q9HBL6 345 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 ZDHHC18Q9NUE0 388 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 NDOR1Q9UHB4 597 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 FADS2O95864 444 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 HDCP19113 662 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 ARL2P36404 184 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 OMPP47874 163 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 LIPEQ05469 1076 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 AP5B1Q2VPB7 878 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 CCDC185Q8N715 623 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 UBR7Q8N806 425 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 CLP1Q92989 425 aaKnown RBP13.9□□□□□ -0.18
VTI1B-204ENST00000554659 PTTG2Q9NZH5 202 aa13.9□□□□□ -0.18
VTI1B-204ENST00000554659 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 AP3D1O14617 1153 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 HMGB3O15347 200 aaKnown RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PPTC7Q8NI37 304 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 HEXDCQ8WVB3 486 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 BTN2A3PQ96KV6 586 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 RHBGQ9H310 441 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ST3GAL5Q9UNP4 418 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 TCAF1Q9Y4C2 921 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PGRMC2O15173 223 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 NPHS1O60500 1241 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 TLR5O60602 858 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CCNKO75909 580 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CTPS1P17812 591 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CPTPQ5TA50 214 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FAM151BQ6UXP7 276 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 RPTNQ6XPR3 784 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF781Q8N8C0 355 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 C10orf82Q8WW14 230 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 LPPQ93052 612 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PPM1MQ96MI6 270 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ARHGEF4Q9NR80 690 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CCDC59Q9P031 241 aaKnown RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PCDHB9Q9Y5E1 797 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 SAGE2PA6NJ88 616 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 OR6C75A6NL08 312 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 AREL1O15033 823 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PQBP1O60828 265 aaKnown RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 CD48P09326 243 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 GPR1P46091 355 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 LCP2Q13094 533 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 EGFLAMQ63HQ2 1017 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 GPR20Q99678 358 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ALG2Q9H553 416 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ELL3Q9HB65 397 aaPredicted RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 NUDT4Q9NZJ9 180 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 DNAJB4Q9UDY4 337 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF490Q9ULM2 529 aaPredicted RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 IGLV3-22A0A075B6J6 115 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ELOVL7A1L3X0 281 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 STX16-NPEPL1H3BU86 382 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 STX16O14662 325 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 HIST1H2ABP04908 130 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 GPR158Q5T848 1215 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 ZDHHC20Q5W0Z9 365 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 RAET1GQ6H3X3 334 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FSTL4Q6MZW2 842 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 PLET1Q6UQ28 207 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FAM92BQ6ZTR7 304 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 UBE2R2Q712K3 238 aaPredicted RBP13.89□□□□□ -0.19
VTI1B-204ENST00000554659 HIST3H2AQ7L7L0 130 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 SLCO2A1Q92959 643 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 HIST1H2ACQ93077 130 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 MYO19Q96H55 970 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FAXDC2Q96IV6 333 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 AASDHPPTQ9NRN7 309 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 NKIRAS2Q9NYR9 191 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 NCKAP1Q9Y2A7 1128 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 IRAK3Q9Y616 596 aa13.89□□□□□ -0.19
VTI1B-204ENST00000554659 IRF6O14896 467 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 PCSK2P16519 638 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 CTSKP43235 329 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 ABRQ12979 859 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 DEF8Q6ZN54 512 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF567Q8N184 647 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 STYXQ8WUJ0 223 aa13.88□□□□□ -0.19
VTI1B-204ENST00000554659 GATA5Q9BWX5 397 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms