RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 C19orf57Q0VDD7 668 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 CLN3Q13286 438 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 AMZ1Q400G9 498 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 IYDQ6PHW0 289 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 PCSK4Q6UW60 755 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 MFSD7Q6UXD7 560 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 NPNTQ6UXI9 565 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 TRIM74Q86UV6 250 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 RFX6Q8HWS3 928 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 GALNT13Q8IUC8 556 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 CCNL2Q96S94 520 aaPredicted RBP11.03□□□□□ -0.64
ABCD4-221ENST00000554453 SRPK1Q96SB4 655 aaKnown RBP11.03□□□□□ -0.64
ABCD4-221ENST00000554453 ANP32EQ9BTT0 268 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 RDH14Q9HBH5 336 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
ABCD4-221ENST00000554453 PISDQ9UG56 409 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 SPTA1P02549 2419 aa11.03□□□□□ -0.64
ABCD4-221ENST00000554453 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 IGHV5-10-1A0A0J9YXX1 117 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 FADS2P1A8MWK0 482 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 HGSO14964 777 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 NUAK1O60285 661 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 KRT1P04264 644 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 PRB1P04280 392 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 ETV5P41161 510 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CDKN2BP42772 138 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 MAGEA1P43355 309 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CLCNKAP51800 687 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 LIMK2P53671 638 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CFHR1Q03591 330 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 BIRC2Q13490 618 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TRA2AQ13595 282 aaKnown RBP eCLIP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TFDP2Q14188 446 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 C16orf72Q14CZ0 275 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 ODF2Q5BJF6 829 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 PHF19Q5T6S3 580 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CCDC70Q6NSX1 233 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 SARM1Q6SZW1 724 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CCDC81Q6ZN84 652 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 MARK2Q7KZI7 788 aaKnown RBP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 LYSMD3Q7Z3D4 306 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 JAMLQ86YT9 394 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 RCOR2Q8IZ40 523 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 SFRP1Q8N474 314 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TC2NQ8N9U0 490 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 GPR26Q8NDV2 337 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 OR4D9Q8NGE8 314 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TTC9Q92623 222 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 USP7Q93009 1102 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TEKT5Q96M29 485 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 NUDT22Q9BRQ3 303 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 CARD9Q9H257 536 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 GLOD4Q9HC38 313 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 TRIM39Q9HCM9 518 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 RAD18Q9NS91 495 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 AKAP7Q9P0M2 348 aaPredicted RBP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 PDP2Q9P2J9 529 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 HYOU1Q9Y4L1 999 aa11.02□□□□□ -0.65
ABCD4-221ENST00000554453 OAS3Q9Y6K5 1087 aaKnown RBP11.02□□□□□ -0.65
ABCD4-221ENST00000554453 OR5K4A6NMS3 321 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SPOPO43791 374 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 CST8O60676 142 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 ZRANB2O95218 330 aaKnown RBP eCLIP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 LCA5LO95447 670 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 NDST3O95803 873 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 EPOP01588 193 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TNNT1P13805 278 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 ITIH1P19827 911 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 PTPN3P26045 913 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 NOP2P46087 812 aaKnown RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 DCDC1P59894 354 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 GPLD1P80108 840 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 MAP9Q49MG5 647 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TAF1BQ53T94 588 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 FAM182AQ5T1J6 154 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TMEM164Q5U3C3 297 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 NKAIN2Q5VXU1 208 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TMEM71Q6P5X7 295 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 B4GALNT4Q76KP1 1039 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 CHST15Q7LFX5 561 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 KDELC2Q7Z4H8 507 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 DTX1Q86Y01 620 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TRAM1L1Q8N609 369 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SH3KBP1Q96B97 665 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SPATA16Q9BXB7 569 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 TRIM5Q9C035 493 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 KCNK4Q9NYG8 393 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 ATXN10Q9UBB4 475 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 NFKBIL1Q9UBC1 381 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SAE1Q9UBE0 346 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SHOC2Q9UQ13 582 aa11.01□□□□□ -0.65
ABCD4-221ENST00000554453 PCYT1BQ9Y5K3 369 aaPredicted RBP11.01□□□□□ -0.65
ABCD4-221ENST00000554453 SDK2Q58EX2 2172 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms