RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ADCY8P40145 1251 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 MARCKSL1P49006 195 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 PDX1P52945 283 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 GABREP78334 506 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 WASHC5Q12768 1159 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 EIF3IQ13347 325 aaKnown RBP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 XRCC4Q13426 336 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 GALNT3Q14435 633 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 NR1D2Q14995 579 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 TCEA2Q15560 299 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CLPPQ16740 277 aaPredicted RBP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 KAZNQ674X7 775 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 PDPK2PQ6A1A2 396 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 BBS12Q6ZW61 710 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 ZNF438Q7Z4V0 828 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CCNJLQ8IV13 435 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CCDC50Q8IVM0 306 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 TXLNBQ8N3L3 684 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CCL4L1Q8NHW4 92 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 WDR36Q8NI36 951 aaKnown RBP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 QKIQ96PU8 341 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 OR2M4Q96R27 311 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 GFM1Q96RP9 751 aaKnown RBP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 WDR24Q96S15 920 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CEP41Q9BYV8 373 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 FAM83DQ9H4H8 585 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 RMI1Q9H9A7 625 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 ZFYVE1Q9HBF4 777 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 THSD1Q9NS62 852 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 SEPT10Q9P0V9 454 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 TAAR2Q9P1P5 351 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 IMPACTQ9P2X3 320 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 SAE1Q9UBE0 346 aaPredicted RBP10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 TFR2Q9UP52 801 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 PCDHA3Q9Y5H8 950 aa10.34□□□□□ -0.75
PTCD2P1-201ENST00000554393 CCDC187A0A096LP49 1063 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZW10O43264 779 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZNF189O75820 626 aaPredicted RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 EPOP01588 193 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 MPOP05164 745 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 FGF1P05230 155 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 RPLP0P05388 317 aaKnown RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 CTNNA2P26232 953 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 CCKBRP32239 447 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ABCG1P45844 678 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 POLD2P49005 469 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 VAV2P52735 878 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 PCBP4P57723 403 aaKnown RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 CTBSQ01459 385 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ADCY2Q08462 1091 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 COL28A1Q2UY09 1125 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 PYCR3Q53H96 274 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 LRRC69Q6ZNQ3 347 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 TMC3Q7Z5M5 1100 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 SPRED1Q7Z699 444 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 PDZD3Q86UT5 571 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 GAS2L3Q86XJ1 694 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 GALNT13Q8IUC8 556 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZNF248Q8NDW4 579 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 SPATA22Q8NHS9 363 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZDHHC1Q8WTX9 485 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 KRT35Q92764 455 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ATXN7L3BQ96GX2 97 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 TMEM74Q96NL1 305 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 FCRL5Q96RD9 977 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 AGAP2Q99490 1192 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZSCAN5AQ9BUG6 496 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 STRADBQ9C0K7 418 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 LRRN3Q9H3W5 708 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 TRABDQ9H4I3 376 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ASCL3Q9NQ33 180 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 SPATS2LQ9NUQ6 558 aaKnown RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 LRIT1Q9P2V4 623 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 FAM153AQ9UHL3 310 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 TRHDEQ9UKU6 1024 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 CNOT6Q9ULM6 557 aaKnown RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 SATB2Q9UPW6 733 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 ZNF711Q9Y462 761 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 RNF215Q9Y6U7 377 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 KALRNO60229 2985 aa10.33□□□□□ -0.76
PTCD2P1-201ENST00000554393 AHCTF1Q8WYP5 2266 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 LOC285095A0A1B0GVY8 99 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 A0A1W2PNU3 283 aaPredicted RBP10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 FADS2P1A8MWK0 482 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 GPR89AB7ZAQ6 455 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 INPP4BO15327 924 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 DNAJC6O75061 913 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 MT-CYBP00156 380 aaPredicted RBP10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 GPR89BP0CG08 455 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 NFKB1P19838 968 aa10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 AK4P27144 223 aaPredicted RBP10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 RBMS1P29558 406 aaKnown RBP10.32□□□□□ -0.76
PTCD2P1-201ENST00000554393 CD68P34810 354 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms