RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 FLRT1Q9NZU1 646 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 TRIM10Q9UDY6 481 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 SH3BGRL2Q9UJC5 107 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 PRDM4Q9UKN5 801 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 DUSP12Q9UNI6 340 aa5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ZFP37Q9Y6Q3 630 aaPredicted RBP5.34□□□□□ -1.55
MTHFD1-206ENST00000554353 ABCB11O95342 1321 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A18PA6NE21 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A16PA6NEW6 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A9PA6NNJ1 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A5PA8MXJ8 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 H0Y626 953 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GCOM1H8Y6P7 765 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 M0QYT0 321 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MEIS2O14770 477 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MGST3O14880 152 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ATP8B1O43520 1251 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 KIF1CO43896 1103 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 EXOC3O60645 756 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RAMP2O60895 175 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 KRT38O76015 456 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 SEC31AO94979 1220 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CLTBP09497 229 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A15PP0C7V4 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM90A14PP0C7W9 464 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 TMIGD3P0DMS9 266 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GCFC2P16383 781 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 DRD4P21917 467 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CHMP24386 653 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ITPKBP27987 946 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CD151P48509 253 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RARRES1P49788 294 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MRPL12P52815 198 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 VAMP2P63027 116 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RNASELQ05823 741 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GABPB1Q06547 395 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CCDC15Q0P6D6 951 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 SF3A3Q12874 501 aaKnown RBP eCLIP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 LMAN2Q12907 356 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 COASYQ13057 564 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 LRRC26Q2I0M4 334 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 QRICH1Q2TAL8 776 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MMEL1Q495T6 779 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MFSD14CQ5VZR4 134 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ACAD10Q6JQN1 1059 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RPUSD3Q6P087 351 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ALKBH5Q6P6C2 394 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MTHFD1LQ6UB35 978 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 SLC29A4Q7RTT9 530 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GALNT7Q86SF2 657 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM114A1Q8IWE2 563 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 IQCF2Q8IXL9 164 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ZC3H3Q8IXZ2 948 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RNF168Q8IYW5 571 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 TDHQ8IZJ6 230 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 KRT222Q8N1A0 295 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 PNPLA1Q8N8W4 532 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 FAM71DQ8N9W8 422 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 UTP15Q8TED0 518 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GIMAP1Q8WWP7 306 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 OVCA2Q8WZ82 227 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CUL5Q93034 780 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 EEF2KMTQ96G04 330 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 REXO5Q96IC2 774 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 UROC1Q96N76 676 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MMS19Q96T76 1030 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 NAPGQ99747 312 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MACROD1Q9BQ69 325 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MECRQ9BV79 373 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 NUP58Q9BVL2 599 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 PARD6BQ9BYG5 372 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 EDEM3Q9BZQ6 932 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RPAP3Q9H6T3 665 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 ANKZF1Q9H8Y5 726 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 PSTPIP2Q9H939 334 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 KCNMB3Q9NPA1 279 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 CCDC177Q9NQR7 707 aaPredicted RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 HOXC10Q9NYD6 342 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 PCSK1NQ9UHG2 260 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 DDX25Q9UHL0 483 aaKnown RBP5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MOSPD1Q9UJG1 213 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 PACSIN3Q9UKS6 424 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 RAB21Q9UL25 225 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 NFU1Q9UMS0 254 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 A0A0G2JMZ2 1700 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MYO9BQ13459 2157 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MCM3APO60318 1980 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 MYH10P35580 1976 aa5.33□□□□□ -1.56
MTHFD1-206ENST00000554353 A0A1W2PRG0 241 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 FRMD3A2A2Y4 597 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CTAGE9A4FU28 777 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 SLC15A5A6NIM6 579 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 EIF3CLB5ME19 914 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 E9PMD0 336 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 PI4K2BG5E9Z4 385 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 M0QZQ0 153 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MAP2K7O14733 419 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms