RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 ADAMTS14Q8WXS8 1223 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 GTF3C6Q969F1 213 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 SKA1Q96BD8 255 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 MAP7D2Q96T17 732 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 PIP5K1AQ99755 562 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 ZPBPQ9BS86 351 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 SLC25A33Q9BSK2 321 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 UBA5Q9GZZ9 404 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 PCDHB16Q9NRJ7 776 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 DIAPH3Q9NSV4 1193 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 ORC3Q9UBD5 711 aaPredicted RBP4.27□□□□□ -1.73
FCF1-204ENST00000553673 KDRP35968 1356 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 PLEKHG2Q9H7P9 1386 aa4.27□□□□□ -1.73
FCF1-204ENST00000553673 CRYBG1Q9Y4K1 1723 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 A0A1W2PRG0 241 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 DYTNA2CJ06 578 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 TIMM23O14925 209 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 SEC31AO94979 1220 aaKnown RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 CH25HO95992 272 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 DDX5P17844 614 aaKnown RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 SHMT1P34896 483 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 ECT2LQ008S8 904 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 OLIG2Q13516 323 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 DRAP1Q14919 205 aaPredicted RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 PLCB4Q15147 1175 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 TBCEQ15813 527 aaPredicted RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 MTHFSDQ2M296 383 aaKnown RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 PPP6R3Q5H9R7 873 aaPredicted RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 C6orf141Q5SZD1 244 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 LCTLQ6UWM7 567 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 NOXA1Q86UR1 476 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 HUS1BQ8NHY5 278 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 PIGBQ92521 554 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 INTS12Q96CB8 462 aaKnown RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 STRA6Q9BX79 667 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 GLIS2Q9BZE0 524 aaPredicted RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 SLC6A13Q9NSD5 602 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 SELENONQ9NZV5 590 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 FBXO9Q9UK97 447 aaPredicted RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 INTS6Q9UL03 887 aaKnown RBP4.26□□□□□ -1.73
FCF1-204ENST00000553673 ERVK-11Q9UQG0 969 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 AKAP12Q02952 1782 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 NRAPQ86VF7 1730 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 ABCA3Q99758 1704 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
FCF1-204ENST00000553673 TMEM202A6NGA9 273 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE7O76087 117 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 BAIAP3O94812 1187 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 NGFRP08138 427 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE12FP0CL80 117 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE12GP0CL81 117 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE12IP0CL82 117 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 HOXA11P31270 313 aaPredicted RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 RPS3AP61247 264 aaKnown RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 LTBQ06643 244 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 TMEM115Q12893 351 aaPredicted RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE1Q13065 139 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 GAGE4Q13068 117 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 FGFBP1Q14512 234 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 WDR43Q15061 677 aaKnown RBP eCLIP4.25□□□□□ -1.73
FCF1-204ENST00000553673 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 USP41Q3LFD5 358 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 SGO1Q5FBB7 561 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 ZC3HC1Q86WB0 502 aaKnown RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 WDR63Q8IWG1 891 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 SLC35F3Q8IY50 421 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 ZBTB2Q8N680 514 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 PSPC1Q8WXF1 523 aaKnown RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 ERGIC1Q969X5 290 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 PABPC5Q96DU9 382 aaKnown RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 FAM110AQ9BQ89 295 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 TMOD3Q9NYL9 352 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 EHD2Q9NZN4 543 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 DLGAP2Q9P1A6 1054 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 LIMA1Q9UHB6 759 aaKnown RBP4.25□□□□□ -1.73
FCF1-204ENST00000553673 NWD2Q9ULI1 1742 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 PLCH1Q4KWH8 1693 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 THSD7AQ9UPZ6 1657 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 COL18A1P39060 1754 aa4.25□□□□□ -1.73
FCF1-204ENST00000553673 ATXN2Q99700 1313 aaKnown RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 PEAK1Q9H792 1746 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 TRIP12Q14669 1992 aaPredicted RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 A0A0U1RQJ8 604 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 TGFB1I1O43294 461 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 HSPA12AO43301 675 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 SLC28A2O43868 658 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 PAGE4O60829 102 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 DDX58O95786 925 aaKnown RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 ACAA1P09110 424 aaPredicted RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 STX2P32856 288 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 ARL3P36405 182 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 PIGAP37287 484 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 PIP4K2AP48426 406 aaPredicted RBP4.24□□□□□ -1.73
FCF1-204ENST00000553673 PEX5P50542 639 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 ZXDBP98169 803 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 SORDQ00796 357 aa4.24□□□□□ -1.73
FCF1-204ENST00000553673 NAE1Q13564 534 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms