RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 OLIG2Q13516 323 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 LINC00523Q86TU6 105 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 TRIM74Q86UV6 250 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 PHYKPLQ8IUZ5 450 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
CPSF2-202ENST00000553427 ACTRT1Q8TDG2 376 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 GLYATL1Q969I3 302 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 OR2M4Q96R27 311 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 TMEM168Q9H0V1 697 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 IL26Q9NPH9 171 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 ANGPTL2Q9UKU9 493 aa18.31■□□□□ 0.52
CPSF2-202ENST00000553427 OAS3Q9Y6K5 1087 aaKnown RBP18.31■□□□□ 0.52
CPSF2-202ENST00000553427 GOLGA4Q13439 2230 aaKnown RBP18.31■□□□□ 0.52
CPSF2-202ENST00000553427 SPEGQ15772 3267 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 FAM221BA6H8Z2 402 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 STX7O15400 261 aaKnown RBP18.3■□□□□ 0.52
CPSF2-202ENST00000553427 USP12O75317 370 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 CRTAMO95727 393 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 LPOP22079 712 aaPredicted RBP18.3■□□□□ 0.52
CPSF2-202ENST00000553427 GNPDA1P46926 289 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 POLD2P49005 469 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 DAB2P98082 770 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 LRP8Q14114 963 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 SPARCL1Q14515 664 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 CYP1B1Q16678 543 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 DOK6Q6PKX4 331 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 SLC35F3Q8IY50 421 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 ARL10Q8N8L6 244 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 PTCD2Q8WV60 388 aaKnown RBP18.3■□□□□ 0.52
CPSF2-202ENST00000553427 GSDMCQ9BYG8 508 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 ETNK1Q9HBU6 452 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 BPIFA1Q9NP55 256 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 EIF2B3Q9NR50 452 aaKnown RBP18.3■□□□□ 0.52
CPSF2-202ENST00000553427 SMOXQ9NWM0 555 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 DOLKQ9UPQ8 538 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 TMEM98Q9Y2Y6 226 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 NEUROG3Q9Y4Z2 214 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 ARL5AQ9Y689 179 aa18.3■□□□□ 0.52
CPSF2-202ENST00000553427 DNAJC6O75061 913 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 TCP1P17987 556 aaKnown RBP18.29■□□□□ 0.52
CPSF2-202ENST00000553427 RPL22P35268 128 aaKnown RBP18.29■□□□□ 0.52
CPSF2-202ENST00000553427 ADCY8P40145 1251 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 ZNF140P52738 457 aaPredicted RBP18.29■□□□□ 0.52
CPSF2-202ENST00000553427 ILF3Q12906 894 aaKnown RBP eCLIP18.29■□□□□ 0.52
CPSF2-202ENST00000553427 PEX6Q13608 980 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 NR0B2Q15466 257 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 SMAD1Q15797 465 aaKnown RBP18.29■□□□□ 0.52
CPSF2-202ENST00000553427 PYCR3Q53H96 274 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 TAF8Q7Z7C8 310 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 GALNT13Q8IUC8 556 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 PNPLA1Q8N8W4 532 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 GLIS1Q8NBF1 620 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 COG1Q8WTW3 980 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 NAT6Q93015 286 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 MS4A14Q96JA4 679 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 TRIM39Q9HCM9 518 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 RAB6BQ9NRW1 208 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 MOSPD1Q9UJG1 213 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 GPR34Q9UPC5 381 aa18.29■□□□□ 0.52
CPSF2-202ENST00000553427 GLYATL1P3A0A0U1RQE8 302 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 EME2A4GXA9 379 aaPredicted RBP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 GAPDHSO14556 408 aaPredicted RBP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 HYAL3O43820 417 aaPredicted RBP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 VEGFDO43915 354 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 SLC25A14O95258 325 aaPredicted RBP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 ETS1P14921 441 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 PSMA3P25788 255 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 E2F1Q01094 437 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 ITGA9Q13797 1035 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 ATP13A5Q4VNC0 1218 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 OGFOD3Q6PK18 319 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 TMPRSS7Q7RTY8 843 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 NRROSQ86YC3 692 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 CHCHD4Q8N4Q1 142 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 APPL1Q9UKG1 709 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 TMPRSS11EQ9UL52 423 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 ZNF106Q9H2Y7 1883 aaKnown RBP18.28■□□□□ 0.52
CPSF2-202ENST00000553427 BPTFQ12830 3046 aa18.28■□□□□ 0.52
CPSF2-202ENST00000553427 CHD8Q9HCK8 2581 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 E7EVH7 732 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 LDB2O43679 373 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 NUAK1O60285 661 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 ASMTLO95671 621 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 HADHAP40939 763 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 KCNJ1P48048 391 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 GNG11P61952 73 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 CDH17Q12864 832 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 CHRNA6Q15825 494 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 PAPD7Q5XG87 772 aaKnown RBP18.27■□□□□ 0.52
CPSF2-202ENST00000553427 GSTA5Q7RTV2 222 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 ADGRG6Q86SQ4 1221 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 CACTIN-AS1Q8N1I8 211 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 KYQ8NBH2 561 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 GPR156Q8NFN8 814 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 OR4K2Q8NGD2 314 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 OR6C4Q8NGE1 309 aa18.27■□□□□ 0.52
CPSF2-202ENST00000553427 CCL4L1Q8NHW4 92 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms