RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 CNOT6Q9ULM6 557 aaKnown RBP12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ST14Q9Y5Y6 855 aa12.86□□□□□ -0.35
ACTN1-207ENST00000553290 ZFC3H1O60293 1989 aaKnown RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FADS2P1A8MWK0 482 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 CDRT15L2A8MXV6 281 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PLD2O14939 933 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 DNAJC6O75061 913 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PMPCBO75439 489 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 EPOP01588 193 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 ITGA2BP08514 1039 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PIRTP0C851 137 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 CD68P34810 354 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 GPR3P46089 330 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 XRCC4Q13426 336 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 NR1D2Q14995 579 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 CLPPQ16740 277 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 BBS12Q6ZW61 710 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 RAB11FIP2Q7L804 512 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PID1Q7Z2X4 250 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 B3GNT8Q7Z7M8 397 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 HTR3CQ8WXA8 447 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 QKIQ96PU8 341 aaKnown RBP eCLIP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FERMT1Q9BQL6 677 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 FOXP3Q9BZS1 431 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 KLHL8Q9P2G9 620 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 SHOC2Q9UQ13 582 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 ZNF711Q9Y462 761 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PLEKHM1Q9Y4G2 1056 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 OAS3Q9Y6K5 1087 aaKnown RBP12.85□□□□□ -0.35
ACTN1-207ENST00000553290 BPTFQ12830 3046 aa12.85□□□□□ -0.35
ACTN1-207ENST00000553290 LOC285095A0A1B0GVY8 99 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 GPR89AB7ZAQ6 455 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 APOC4-APOC2K7ER74 178 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 PJA2O43164 708 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 B4GAT1O43505 415 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 TNFSF15O95150 251 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CPNE6O95741 557 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 APOC2P02655 101 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 GPR89BP0CG08 455 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 NFKB1P19838 968 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 ALDH4A1P30038 563 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CETN2P41208 172 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 VAV2P52735 878 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 WNT3AP56704 352 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 ZFP36L1Q07352 338 aaKnown RBP12.84□□□□□ -0.35
ACTN1-207ENST00000553290 ZNF569Q5MCW4 686 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 BROXQ5VW32 411 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 RAD9BQ6WBX8 426 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CLEC14AQ86T13 490 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 PIM3Q86V86 326 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 TRAM1L1Q8N609 369 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 KCNE4Q8WWG9 221 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 TMEM159Q96B96 161 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 HAUS1Q96CS2 278 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-207ENST00000553290 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CARD9Q9H257 536 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 TRABDQ9H4I3 376 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 PRORYQ9H606 182 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 UBP1Q9NZI7 540 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 ATXN7L1Q9ULK2 861 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-207ENST00000553290 REXO2Q9Y3B8 237 aaKnown RBP12.84□□□□□ -0.35
ACTN1-207ENST00000553290 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
ACTN1-207ENST00000553290 CACNA1GO43497 2377 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 H7C0C1 242 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 PPM1DO15297 605 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 NUAK1O60285 661 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 SLC25A14O95258 325 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-207ENST00000553290 SLC4A1P02730 911 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 CTNNA2P26232 953 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 PTPN7P35236 360 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 UGT1A5P35504 534 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 HMGCLP35914 325 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 ATP5OP48047 213 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 UCNP55089 124 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 RWDD2BP57060 319 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms