RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 SIGLEC6O43699 453 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CTSEP14091 401 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CASQ1P31415 396 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 FNTAP49354 379 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 ZNF140P52738 457 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CDH17Q12864 832 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 GPS1Q13098 491 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 SEPT6Q14141 434 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 POU6F1Q14863 301 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 TRIP6Q15654 476 aaKnown RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CHRNA6Q15825 494 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 DEFB133Q30KQ1 61 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 ZNF648Q5T619 568 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 FAM151BQ6UXP7 276 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 C4orf22Q6V702 233 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 MARK2Q7KZI7 788 aaKnown RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 DNAAF3Q8N9W5 541 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 OR13C4Q8NGS5 318 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 OR4C6Q8NH72 309 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CARS2Q9HA77 564 aaKnown RBP14.01□□□□□ -0.17
PTCH1-226ENST00000553011 FTSJ1Q9UET6 329 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 FKBPLQ9UIM3 349 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 TMPRSS11EQ9UL52 423 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 SUFUQ9UMX1 484 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 SLC17A4Q9Y2C5 497 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 NEU2Q9Y3R4 380 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CSNK1G3Q9Y6M4 447 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 CEP295Q9C0D2 2601 aa14.01□□□□□ -0.17
PTCH1-226ENST00000553011 GLYATL1P3A0A0U1RQE8 302 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CCDC78A2IDD5 438 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 NEMP2A6NFY4 417 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CCL22O00626 93 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A9O60656 530 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 ASMTLO95671 621 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CRTAMO95727 393 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A6P19224 532 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A1P22309 533 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A4P22310 534 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CA5AP35218 305 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A3P35503 534 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A5P35504 534 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 GNPDA1P46926 289 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 SIM1P81133 766 aaPredicted RBP14□□□□□ -0.17
PTCH1-226ENST00000553011 TMPRSS15P98073 1019 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 ATP13A5Q4VNC0 1218 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CCDC38Q502W7 563 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CERCAMQ5T4B2 595 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 PDPK2PQ6A1A2 396 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 MICALCLQ6ZW33 695 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CCL4L1Q8NHW4 92 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 GLYATL1Q969I3 302 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CNDP2Q96KP4 475 aaKnown RBP14□□□□□ -0.17
PTCH1-226ENST00000553011 TBATAQ96M53 351 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 C16orf45Q96MC5 204 aaPredicted RBP14□□□□□ -0.17
PTCH1-226ENST00000553011 CDC6Q99741 560 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 TMEM168Q9H0V1 697 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A7Q9HAW7 530 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A10Q9HAW8 530 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UGT1A8Q9HAW9 530 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 CASS4Q9NQ75 786 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 EIF2B3Q9NR50 452 aaKnown RBP14□□□□□ -0.17
PTCH1-226ENST00000553011 NLGN3Q9NZ94 848 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 UNC13CQ8NB66 2214 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 PTPRBP23467 1997 aa14□□□□□ -0.17
PTCH1-226ENST00000553011 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 TCRBV7S3A2A0A539 114 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 YY2O15391 372 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 PPFIA2O75334 1257 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 MTX2O75431 263 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 SLC25A14O95258 325 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 LDOC1O95751 146 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 IVLP07476 585 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 ANXA6P08133 673 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 MYF5P13349 255 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 PAFAH1B1P43034 410 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 DNAJC3Q13217 504 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 ELOCQ15369 112 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 KHDC1Q4VXA5 237 aaKnown RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 ZDHHC20Q5W0Z9 365 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 KLHL7Q8IXQ5 586 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 FSTL5Q8N475 847 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 GRK7Q8WTQ7 553 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 SCARF2Q96GP6 870 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 DNAJC1Q96KC8 554 aaKnown RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 OR2AG1Q9H205 316 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 ATXN10Q9UBB4 475 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 PLEKHM1Q9Y4G2 1056 aa13.99□□□□□ -0.17
PTCH1-226ENST00000553011 PCYT1BQ9Y5K3 369 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-226ENST00000553011 TNFSF14O43557 240 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 DNAJC6O75061 913 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 PRAMEF1O95521 474 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 ECEL1O95672 775 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 GAS8O95995 478 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 ALPPL2P10696 532 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 TPSB2P20231 275 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 ADCY8P40145 1251 aa13.98□□□□□ -0.17
PTCH1-226ENST00000553011 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-226ENST00000553011 XIAPP98170 497 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms