RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SLC6A3Q01959 620 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 GCNT1Q02742 428 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 DNM1Q05193 864 aaKnown RBP5.36□□□□□ -1.55
HOXB3-213ENST00000552000 DEUP1Q05D60 604 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 ILF3Q12906 894 aaKnown RBP eCLIP5.36□□□□□ -1.55
HOXB3-213ENST00000552000 SQSTM1Q13501 440 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 NAA30Q147X3 362 aaPredicted RBP5.36□□□□□ -1.55
HOXB3-213ENST00000552000 MEA1Q16626 185 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 PTPN20Q4JDL3 420 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 ERAP2Q6P179 960 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM71Q6P5X7 295 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 OLFML1Q6UWY5 402 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 SLC26A9Q7LBE3 791 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF354CQ86Y25 554 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 TP53INP2Q8IXH6 220 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 NAGSQ8N159 534 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 PELI3Q8N2H9 469 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 WDTC1Q8N5D0 677 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 GIMAP7Q8NHV1 300 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 AHCYL2Q96HN2 611 aaKnown RBP5.36□□□□□ -1.55
HOXB3-213ENST00000552000 C1orf74Q96LT6 269 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 C5orf34Q96MH7 638 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 NPY6RQ99463 290 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 TSG101Q99816 390 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 DPYSL5Q9BPU6 564 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 NCAPGQ9BPX3 1015 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 ZPBPQ9BS86 351 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 LGR4Q9BXB1 951 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 GSDMCQ9BYG8 508 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 SLC29A3Q9BZD2 475 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 ZYG11BQ9C0D3 744 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 TTYH3Q9C0H2 523 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 TWSG1Q9GZX9 223 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 KCNF1Q9H3M0 494 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 SYNCQ9H7C4 482 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 WDR26Q9H7D7 661 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 FBXO8Q9NRD0 319 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.36□□□□□ -1.556e-9■■■■□ 25.1
HOXB3-213ENST00000552000 RCOR3Q9P2K3 495 aaPredicted RBP5.36□□□□□ -1.55
HOXB3-213ENST00000552000 KLHL3Q9UH77 587 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 USP25Q9UHP3 1055 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 DNAI1Q9UI46 699 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 HPCAL4Q9UM19 191 aa5.36□□□□□ -1.55
HOXB3-213ENST00000552000 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 FAM170AA1A519 330 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 TRIM49BA6NDI0 452 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PDE2AO00408 941 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 POLR1CO15160 346 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PMM2O15305 246 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 HNRNPRO43390 633 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 FUCA1P04066 466 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 HOXC4P09017 264 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF28P17035 718 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CMA1P23946 247 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CD68P34810 354 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 MMP12P39900 470 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 USP8P40818 1118 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PRCPP42785 496 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SYKP43405 635 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 GNPDA1P46926 289 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SUOXP51687 545 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CETN1Q12798 172 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 RAPGEF1Q13905 1077 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 UGP2Q16851 508 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CFAP58Q5T655 872 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CPZQ66K79 652 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 RWDD4Q6NW29 188 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 C6orf15Q6UXA7 325 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ARHGAP22Q7Z5H3 698 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PHLDB2Q86SQ0 1253 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 FAM131BQ86XD5 332 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ZSWIM9Q86XI8 627 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SLC34A3Q8N130 599 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 C1orf131Q8NDD1 294 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF397Q8NF99 534 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 OR10G6Q8NH81 332 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 NCSTNQ92542 709 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 INTS4Q96HW7 963 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 EXOC2Q96KP1 924 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 NSUN5Q96P11 429 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SLC25A23Q9BV35 468 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ULBP3Q9BZM4 244 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 UNKQ9C0B0 810 aaKnown RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 KLC2Q9H0B6 622 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 UBE2TQ9NPD8 197 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SLAMF7Q9NQ25 335 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PDP2Q9P2J9 529 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 RCOR1Q9UKL0 485 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 STAP1Q9ULZ2 295 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 CNTN6Q9UQ52 1028 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 HPSEQ9Y251 543 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 SLC5A6Q9Y289 635 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 ATP8A1Q9Y2Q0 1164 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 MFHAS1Q9Y4C4 1052 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 PLEKHM1Q9Y4G2 1056 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms