RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 C1orf54Q8WWF1 131 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 LRRC40Q9H9A6 602 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 RMI1Q9H9A7 625 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 IL17CQ9P0M4 197 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 GPR34Q9UPC5 381 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 ZNF148Q9UQR1 794 aa15.3■□□□□ 0.04
PRPF40B-211ENST00000551063 GPR89AB7ZAQ6 455 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PSMD3O43242 534 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 KIF5CO60282 957 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 CEP104O60308 925 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 ASMTLO95671 621 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 AP2A1O95782 977 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 FUCA1P04066 466 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 GPR89BP0CG08 455 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 ACTN2P35609 894 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 POLD2P49005 469 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PEX6Q13608 980 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 LRP8Q14114 963 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 TAF1AQ15573 450 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PYCR3Q53H96 274 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 CCNI2Q6ZMN8 369 aaPredicted RBP15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 EFL1Q7Z2Z2 1120 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 GALNT13Q8IUC8 556 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PHYKPLQ8IUZ5 450 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 CACTIN-AS1Q8N1I8 211 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 KYQ8NBH2 561 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 IFI44Q8TCB0 444 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PTCD2Q8WV60 388 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 GLYATL1Q969I3 302 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 VPS35Q96QK1 796 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 C19orf43Q9BQ61 176 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 APOL2Q9BQE5 337 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 HOMER3Q9NSC5 361 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 PKP3Q9Y446 797 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 OAS3Q9Y6K5 1087 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 SPEGQ15772 3267 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 LRP4O75096 1905 aa15.29■□□□□ 0.04
PRPF40B-211ENST00000551063 C2orf81A6NN90 581 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 ERI2A8K979 691 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 STX7O15400 261 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 DNAJC6O75061 913 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 IFNB1P01574 187 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 MYF5P13349 255 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 FDFT1P37268 417 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 ADCY8P40145 1251 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 PDE1BQ01064 536 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 OLIG2Q13516 323 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 TCEA2Q15560 299 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 LONRF2Q1L5Z9 754 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 HES3Q5TGS1 186 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 DENND5AQ6IQ26 1287 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 GUSBP11Q6P575 273 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 OGFOD3Q6PK18 319 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 NRROSQ86YC3 692 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 RASGEF1CQ8N431 466 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 CCDC89Q8N998 374 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 FAM46DQ8NEK8 389 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 GPR156Q8NFN8 814 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 OR6C4Q8NGE1 309 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 BRSK1Q8TDC3 778 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 PBKQ96KB5 322 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 SUDS3Q9H7L9 328 aaPredicted RBP15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 PADI4Q9UM07 663 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 DRG1Q9Y295 367 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 IGF2RP11717 2491 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 CHD6Q8TD26 2715 aa15.28■□□□□ 0.04
PRPF40B-211ENST00000551063 FRYQ5TBA9 3013 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 ZFHX4Q86UP3 3567 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 GLYATL1P3A0A0U1RQE8 302 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 CPED1A4D0V7 1026 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 NUAK1O60285 661 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 USP12O75317 370 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 SLC25A14O95258 325 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 CRTAMO95727 393 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 LPOP22079 712 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 CXCR5P32302 372 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 CTBSQ01459 385 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 MSLNQ13421 630 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 ITGA9Q13797 1035 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 GSE1Q14687 1217 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 SLC35F6Q8N357 371 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 WDR48Q8TAF3 677 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 DPEP2Q9H4A9 486 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 TRIM39Q9HCM9 518 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 SMOXQ9NWM0 555 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 SIRPGQ9P1W8 387 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 PAK5Q9P286 719 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 GULP1Q9UBP9 304 aa15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 TTC7AQ9ULT0 858 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-211ENST00000551063 GPSM3Q9Y4H4 160 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms