RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GALNT13Q8IUC8 556 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 OR6C4Q8NGE1 309 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 WDR48Q8TAF3 677 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 CCDC74AQ96AQ1 378 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 CCDC3Q9BQI4 270 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 SPATA16Q9BXB7 569 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 DPEP2Q9H4A9 486 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 LZTFL1Q9NQ48 299 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 ZMIZ1Q9ULJ6 1067 aa17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 AAR2Q9Y312 384 aaKnown RBP17.11■□□□□ 0.33
CHMP1A-208ENST00000550102 LRP8Q14114 963 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 C14orf28Q4W4Y0 310 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 SLC30A9Q6PML9 568 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GLT6D1Q7Z4J2 308 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 PHYKPLQ8IUZ5 450 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 TRAM1L1Q8N609 369 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GPR26Q8NDV2 337 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 CCDC110Q8TBZ0 833 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 BLOC1S5Q8TDH9 187 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 PLEKHG4BQ96PX9 1271 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GORASP1Q9BQQ3 440 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 FICDQ9BVA6 458 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 SYNDIG1Q9H7V2 258 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 TAAR2Q9P1P5 351 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 DKK4Q9UBT3 224 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 CNOT6Q9ULM6 557 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 R3HDM2Q9Y2K5 976 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 GPSM3Q9Y4H4 160 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 OAS3Q9Y6K5 1087 aaKnown RBP17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 UNC13CQ8NB66 2214 aa17.1■□□□□ 0.33
CHMP1A-208ENST00000550102 AURKAO14965 403 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 NOBOXO60393 691 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 CSO75390 466 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 TCEA3O75764 348 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 CAPNS1P04632 268 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 BPIP17213 487 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 HMGCLP35914 325 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 CTBSQ01459 385 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 PYCR3Q53H96 274 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 CERCAMQ5T4B2 595 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 OGFOD3Q6PK18 319 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 ARHGEF18Q6ZSZ5 1173 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 NRROSQ86YC3 692 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 TTC30BQ8N4P2 665 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 MDM1Q8TC05 714 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 LRRC45Q96CN5 670 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 NRSN2Q9GZP1 204 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 RMI1Q9H9A7 625 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 KIF26BQ2KJY2 2108 aa17.09■□□□□ 0.33
CHMP1A-208ENST00000550102 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 C5orf60A6NFR6 353 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 GLB1P16278 677 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 ACTR1BP42025 376 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 ACTR1AP61163 376 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 SPIDRQ14159 915 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 HLTFQ14527 1009 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 ZDHHC20Q5W0Z9 365 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 PROSER1Q86XN7 944 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 FAM71DQ8N9W8 422 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 ZDHHC1Q8WTX9 485 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 GLYATL1Q969I3 302 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 CARD9Q9H257 536 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 ITPR1Q14643 2758 aa17.08■□□□□ 0.32
CHMP1A-208ENST00000550102 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 GPR89AB7ZAQ6 455 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 NUDT21O43809 227 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 DNAJC6O75061 913 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 PPFIA2O75334 1257 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 SLC25A14O95258 325 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 AGTP01019 485 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 GPR89BP0CG08 455 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 CYP4F3Q08477 520 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 RTP5Q14D33 572 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 P3H1Q32P28 736 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 MEI1Q5TIA1 1274 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 CCNJLQ8IV13 435 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 SFTPA2Q8IWL1 248 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 ATG4AQ8WYN0 398 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 FRMD8P1Q9BZ68 369 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 BPIFA1Q9NP55 256 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 ZNHIT2Q9UHR6 403 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 RABGEF1Q9UJ41 708 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 APPL1Q9UKG1 709 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 PKP3Q9Y446 797 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 PCDHB1Q9Y5F3 818 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 ST14Q9Y5Y6 855 aa17.07■□□□□ 0.32
CHMP1A-208ENST00000550102 CHD6Q8TD26 2715 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 D6RAR5 112 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 RPLP0P05388 317 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms