RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CPED1A4D0V7 1026 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 EME2A4GXA9 379 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 USP27XA6NNY8 438 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 KIF5CO60282 957 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 SLC25A14O95258 325 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ETS1P14921 441 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ADCY8P40145 1251 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 RPIAP49247 311 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 CLDN6P56747 220 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ILF3Q12906 894 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PTPRCAPQ14761 206 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 TAF1AQ15573 450 aaPredicted RBP18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PYCR3Q53H96 274 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ZDHHC20Q5W0Z9 365 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GUSBP11Q6P575 273 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 NRROSQ86YC3 692 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ARL10Q8N8L6 244 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GLIS1Q8NBF1 620 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 FAM46DQ8NEK8 389 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GLYATL1Q969I3 302 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PBKQ96KB5 322 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 OR2M4Q96R27 311 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GSDMCQ9BYG8 508 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 LRRC40Q9H9A6 602 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ARFGAP3Q9NP61 516 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GULP1Q9UBP9 304 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 DRG1Q9Y295 367 aaKnown RBP18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 MSRB2Q9Y3D2 182 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PKP3Q9Y446 797 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PLEKHM1Q9Y4G2 1056 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 GPSM3Q9Y4H4 160 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 ST14Q9Y5Y6 855 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 PTPRBP23467 1997 aa18.57■□□□□ 0.56
PRPF40B-206ENST00000547764 STX7O15400 261 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 PSMD3O43242 534 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 DNAJC6O75061 913 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 AP2A1O95782 977 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 GP1BAP07359 652 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 LPOP22079 712 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 AK4P27144 223 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ACTN2P35609 894 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 SPAM1P38567 509 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 E2F1Q01094 437 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 CTBSQ01459 385 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ATP13A5Q4VNC0 1218 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ZNF648Q5T619 568 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 EFL1Q7Z2Z2 1120 aaKnown RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 GALNT15Q8N3T1 639 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 RASGEF1CQ8N431 466 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 CCDC89Q8N998 374 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 KYQ8NBH2 561 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 IFI44Q8TCB0 444 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 BRSK1Q8TDC3 778 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 MS4A14Q96JA4 679 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 DPEP2Q9H4A9 486 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ETNK1Q9HBU6 452 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ZNHIT2Q9UHR6 403 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 FEZ2Q9UHY8 353 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 TMPRSS11EQ9UL52 423 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 PADI4Q9UM07 663 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 KCTD3Q9Y597 815 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 PCYT1BQ9Y5K3 369 aaPredicted RBP18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 CEP295Q9C0D2 2601 aa18.56■□□□□ 0.56
PRPF40B-206ENST00000547764 ASXL3Q9C0F0 2248 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 C2orf81A6NN90 581 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 PPFIA2O75334 1257 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 ZSCAN5DPP0CG00 497 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 MSNP26038 577 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 FDFT1P37268 417 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 KCNJ1P48048 391 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 CHRNA6Q15825 494 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 OGFOD3Q6PK18 319 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 SLC30A9Q6PML9 568 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 FAM151BQ6UXP7 276 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 CCNI2Q6ZMN8 369 aaPredicted RBP18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 TMPRSS12Q86WS5 348 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 MARCH9Q86YJ5 346 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 SFTPA2Q8IWL1 248 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 PRELID2Q8N945 189 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 OR4K2Q8NGD2 314 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 DTX3LQ8TDB6 740 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 VPS35Q96QK1 796 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 OR2AG1Q9H205 316 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 TRIM39Q9HCM9 518 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 HOMER3Q9NSC5 361 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 SPATS2LQ9NUQ6 558 aaKnown RBP18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 TAAR2Q9P1P5 351 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 ATXN10Q9UBB4 475 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 PRKAB1Q9Y478 270 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 KNTC1P50748 2209 aa18.55■□□□□ 0.56
PRPF40B-206ENST00000547764 TPRP12270 2363 aaKnown RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 GLYATL1P3A0A0U1RQE8 302 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 FAM149AA5PLN7 773 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 B4DGG1 531 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 GAPDHSO14556 408 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 NUAK1O60285 661 aa18.54■□□□□ 0.56
PRPF40B-206ENST00000547764 NOBOXO60393 691 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms