RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CRLS1Q9UJA2 301 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PSMD12O00232 456 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 AXIN1O15169 862 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 ECI2O75521 394 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 IL1BP01584 269 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 PRKAA2P54646 552 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 VPS26BQ4G0F5 336 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 UNC50Q53HI1 259 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 SWT1Q5T5J6 900 aaKnown RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 EML4Q9HC35 981 aaKnown RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 ZNHIT2Q9UHR6 403 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 A0A1W2PQ67 120 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 VPS26AO75436 327 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 CD160O95971 181 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 COL6A2P12110 1019 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 PKMP14618 531 aaKnown RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 GNAZP19086 355 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 PEX19P40855 299 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 ERVFC1P60507 584 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 DSG1Q02413 1049 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 LMAN2Q12907 356 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 MAP7D1Q3KQU3 841 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 SLC44A4Q53GD3 710 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 BNC2Q6ZN30 1099 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 EID2BQ96D98 161 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 AARSD1Q9BTE6 412 aaKnown RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
SCAF11-209ENST00000547018 COPS7BQ9H9Q2 264 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-209ENST00000547018 CDK14O94921 469 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 ABLIM3O94929 683 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 HGFP14210 728 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 PEX2P28328 305 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 DIO3P55073 304 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 ACTR3P61158 418 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 STX1BP61266 288 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 TRMT5Q32P41 509 aaKnown RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 Q6ZVU0 165 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 RDH11Q8TC12 318 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 VPS33AQ96AX1 596 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 PLD4Q96BZ4 506 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 LRCH3Q96II8 777 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 HGH1Q9BTY7 390 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 BBS2Q9BXC9 721 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 HECAQ9UBI9 543 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 MYOGP15173 224 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 CCR2P41597 374 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 PFKPQ01813 784 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF648Q5T619 568 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 RETSATQ6NUM9 610 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 SERPINA9Q86WD7 417 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 C12orf76Q8N812 135 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 HJURPQ8NCD3 748 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 PPWD1Q96BP3 646 aaKnown RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 MYO19Q96H55 970 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 UBXN10Q96LJ8 280 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 GCNAQ96QF7 691 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 CDK5RAP1Q96SZ6 601 aaKnown RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 SLC46A2Q9BY10 475 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 GSTO2Q9H4Y5 243 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 AKTIPQ9H8T0 292 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 ZFYVE1Q9HBF4 777 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 DLGAP2Q9P1A6 1054 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 OGDHLQ9ULD0 1010 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 TRPC5OSA6NMA1 111 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 GNRH1P01148 92 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 CTNNB1P35222 781 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 DPP6P42658 865 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 MS4A2Q01362 244 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 HSPA14Q0VDF9 509 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 ZNF678Q5SXM1 525 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 AFTPHQ6ULP2 937 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 OR52B6Q8NGF0 335 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 OR6Y1Q8NGX8 325 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 C2orf49Q9BVC5 232 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-209ENST00000547018 CLPBQ9H078 707 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 BACE2Q9Y5Z0 518 aa12.64□□□□□ -0.39
SCAF11-209ENST00000547018 MAGEC1O60732 1142 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 OR4F21O95013 312 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 PSMC3P17980 439 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 IL2P60568 153 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 CCNIQ14094 377 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 TAF1AQ15573 450 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 NET1Q7Z628 596 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-209ENST00000547018 GPSM1Q86YR5 675 aa12.63□□□□□ -0.39
SCAF11-209ENST00000547018 ADGRG2Q8IZP9 1017 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms