RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NRSN2Q9GZP1 204 aa15.78■□□□□ 0.12
DDX54-204ENST00000546898 DPEP2Q9H4A9 486 aa15.78■□□□□ 0.12
DDX54-204ENST00000546898 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
DDX54-204ENST00000546898 RMI1Q9H9A7 625 aa15.78■□□□□ 0.12
DDX54-204ENST00000546898 CNOT6Q9ULM6 557 aaKnown RBP15.78■□□□□ 0.12
DDX54-204ENST00000546898 AAR2Q9Y312 384 aaKnown RBP15.78■□□□□ 0.12
DDX54-204ENST00000546898 UNC13CQ8NB66 2214 aa15.78■□□□□ 0.12
DDX54-204ENST00000546898 B4DGG1 531 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 F5H423 210 aaPredicted RBP15.77■□□□□ 0.12
DDX54-204ENST00000546898 NOBOXO60393 691 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 ASMTLO95671 621 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 SLC4A1P02730 911 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 PNLIPP16233 465 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 PSMB4P28070 264 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 CCZ1BP86790 482 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 CCZ1P86791 482 aaPredicted RBP15.77■□□□□ 0.12
DDX54-204ENST00000546898 CTBSQ01459 385 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 PYCR3Q53H96 274 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 CERCAMQ5T4B2 595 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 ZDHHC20Q5W0Z9 365 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 DTX3LQ8TDB6 740 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 PTCD2Q8WV60 388 aaKnown RBP15.77■□□□□ 0.12
DDX54-204ENST00000546898 LRRC45Q96CN5 670 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 GRAMD1AQ96CP6 724 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 FAM118BQ9BPY3 351 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 GORASP1Q9BQQ3 440 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 SUDS3Q9H7L9 328 aaPredicted RBP15.77■□□□□ 0.12
DDX54-204ENST00000546898 TAAR2Q9P1P5 351 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 TMEM98Q9Y2Y6 226 aa15.77■□□□□ 0.12
DDX54-204ENST00000546898 PKD1L2Q7Z442 2459 aa15.77■□□□□ 0.11
DDX54-204ENST00000546898 WDFY3Q8IZQ1 3526 aa15.77■□□□□ 0.11
DDX54-204ENST00000546898 C5orf60A6NFR6 353 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GPR89AB7ZAQ6 455 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 DNAJC6O75061 913 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 PPFIA2O75334 1257 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GPR89BP0CG08 455 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GLB1P16278 677 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 BPIP17213 487 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 CHRNA4P43681 627 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 HLTFQ14527 1009 aaKnown RBP eCLIP15.76■□□□□ 0.11
DDX54-204ENST00000546898 RTP5Q14D33 572 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 ALS2CLQ60I27 953 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 RBM44Q6ZP01 1051 aaKnown RBP15.76■□□□□ 0.11
DDX54-204ENST00000546898 MARK2Q7KZI7 788 aaKnown RBP15.76■□□□□ 0.11
DDX54-204ENST00000546898 GLT6D1Q7Z4J2 308 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
DDX54-204ENST00000546898 PHYKPLQ8IUZ5 450 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 TTC30BQ8N4P2 665 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 SLC25A41Q8N5S1 370 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 SLC35B2Q8TB61 432 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 MDM1Q8TC05 714 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GLYATL1Q969I3 302 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 CCDC74AQ96AQ1 378 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 FICDQ9BVA6 458 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 FRMD8P1Q9BZ68 369 aaPredicted RBP15.76■□□□□ 0.11
DDX54-204ENST00000546898 CARD9Q9H257 536 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GRPEL1Q9HAV7 217 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
DDX54-204ENST00000546898 APPL1Q9UKG1 709 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 GPSM3Q9Y4H4 160 aa15.76■□□□□ 0.11
DDX54-204ENST00000546898 OAS3Q9Y6K5 1087 aaKnown RBP15.76■□□□□ 0.11
DDX54-204ENST00000546898 ZFHX4Q86UP3 3567 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 NTN3O00634 580 aaPredicted RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 AURKAO14965 403 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 NUDT21O43809 227 aaKnown RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 CSO75390 466 aaKnown RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 ATP1A1P05023 1023 aaKnown RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 AK4P27144 223 aaPredicted RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 ADRA1AP35348 466 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 ACTR1BP42025 376 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 ACTR1AP61163 376 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 SPIDRQ14159 915 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 MEI1Q5TIA1 1274 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 SLC30A9Q6PML9 568 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 ARHGEF18Q6ZSZ5 1173 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 KLHDC8BQ8IXV7 354 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 TRIM58Q8NG06 486 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 CCDC110Q8TBZ0 833 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 BLOC1S5Q8TDH9 187 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 ZDHHC1Q8WTX9 485 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 VPS35Q96QK1 796 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 SPATS2LQ9NUQ6 558 aaKnown RBP15.75■□□□□ 0.11
DDX54-204ENST00000546898 IL17CQ9P0M4 197 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 ST14Q9Y5Y6 855 aa15.75■□□□□ 0.11
DDX54-204ENST00000546898 NUAK1O60285 661 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 SLC25A14O95258 325 aaPredicted RBP15.74■□□□□ 0.11
DDX54-204ENST00000546898 AGTP01019 485 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 SPAM1P38567 509 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 CYP4F3Q08477 520 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 RPS6KA1Q15418 735 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 ISXQ2M1V0 245 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 P3H1Q32P28 736 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 RANBP10Q6VN20 620 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 TRIM39Q9HCM9 518 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 FEZ2Q9UHY8 353 aaPredicted RBP15.74■□□□□ 0.11
DDX54-204ENST00000546898 RABGEF1Q9UJ41 708 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 R3HDM2Q9Y2K5 976 aaKnown RBP15.74■□□□□ 0.11
DDX54-204ENST00000546898 PKP3Q9Y446 797 aa15.74■□□□□ 0.11
DDX54-204ENST00000546898 PCDHB1Q9Y5F3 818 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms