RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RHOCP08134 193 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GNPDA1P46926 289 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 SLC9A3P48764 834 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 SPIBQ01892 262 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 IRF8Q02556 426 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 IL18Q14116 193 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 NPNTQ6UXI9 565 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 AHSA2Q719I0 299 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 MAF1Q9H063 256 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 NEK6Q9HC98 313 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 CNOT6Q9ULM6 557 aaKnown RBP12.75□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF232Q9UNY5 417 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 C4BP0C0L5 1744 aa12.75□□□□□ -0.37
PTCH1-212ENST00000546744 GABBR2O75899 941 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SPATA31C1P0DKV0 1188 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 UROSP10746 265 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 PRG2P13727 222 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 CD36P16671 472 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ALDH3A2P51648 485 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 MAPK12P53778 367 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 VBP1P61758 197 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 RPL38P63173 70 aaKnown RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 GALNT3Q14435 633 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SMU1Q2TAY7 513 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ZNF781Q8N8C0 355 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 C11orf24Q96F05 449 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SERAC1Q96JX3 654 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 DMAC2Q9NW81 257 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ZDHHC7Q9NXF8 308 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 FADS2P1A8MWK0 482 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 USP12O75317 370 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ITGA10O75578 1167 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 RPN2P04844 631 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 CYP11A1P05108 521 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SLC6A2P23975 617 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 MATKP42679 507 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 MAPK9P45984 424 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ALDH9A1P49189 494 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 POU5F1Q01860 360 aaKnown RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 GNA12Q03113 381 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SFT2D3Q587I9 215 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 PLD5Q8N7P1 536 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TTC29Q8NA56 475 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 RFKQ969G6 155 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 CREB3L1Q96BA8 519 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 P2RY11Q96G91 374 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ADAMTS10Q9H324 1103 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TLE6Q9H808 572 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 VPS51Q9UID3 782 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 NR2E1Q9Y466 385 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 A0A0J9YVX5 310 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 PRPS2P11908 318 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 CXCR2P25025 360 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 CAP2P40123 477 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TUBP50607 506 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 RHOAP61586 193 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 PGM5Q15124 567 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 NAT8LQ8N9F0 302 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 SNIP1Q8TAD8 396 aaKnown RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 DCAKDQ8WVC6 231 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TMEM159Q96B96 161 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 PDP1Q9P0J1 537 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TNFSF13BQ9Y275 285 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 AKAP8O43823 692 aaKnown RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 LRCH4O75427 683 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 BMP7P18075 431 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 F8A1P23610 371 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 IKBKEQ14164 716 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 OVOS1Q6IE37 1185 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 TWIST2Q8WVJ9 160 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-212ENST00000546744 AGAP2Q99490 1192 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
PTCH1-212ENST00000546744 ATP6AP2A0A1C7CYW4 349 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PSIP1O75475 530 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ATP6AP2O75787 350 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 PRAMEF1O95521 474 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 HMBSP08397 361 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 RAB2AP61019 212 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 CYP2A13Q16696 494 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SEZ6Q53EL9 994 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 FAM183BPQ6ZVS7 135 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 GANCQ8TET4 914 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ITPAQ9BY32 194 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 ARL15Q9NXU5 204 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 UPB1Q9UBR1 384 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 MOSPD1Q9UJG1 213 aa12.73□□□□□ -0.37
PTCH1-212ENST00000546744 MRPS7Q9Y2R9 242 aaKnown RBP12.73□□□□□ -0.37
PTCH1-212ENST00000546744 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms