RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 ERGIC2Q96RQ1 377 aa14.34□□□□□ -0.11
USP15-206ENST00000546718 RIOK2Q9BVS4 552 aaKnown RBP14.34□□□□□ -0.11
USP15-206ENST00000546718 ZWILCHQ9H900 591 aa14.34□□□□□ -0.11
USP15-206ENST00000546718 KLHL3Q9UH77 587 aa14.34□□□□□ -0.11
USP15-206ENST00000546718 KCNK6Q9Y257 313 aa14.34□□□□□ -0.11
USP15-206ENST00000546718 RPS6KL1Q9Y6S9 549 aa14.34□□□□□ -0.11
USP15-206ENST00000546718 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
USP15-206ENST00000546718 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 POLR1CO15160 346 aaPredicted RBP14.33□□□□□ -0.12
USP15-206ENST00000546718 RNF8O76064 485 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 TRBC1P01850 177 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 FURINP09958 794 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 FERP16591 822 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 ZNF28P17035 718 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 MAPK9P45984 424 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 STC1P52823 247 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 EPHA4P54764 986 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 MLLT10P55197 1068 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 GFERP55789 205 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 MC1RQ01726 317 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 UBXN1Q04323 297 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 HIST2H2BCQ6DN03 193 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 IYDQ6PHW0 289 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 CHST15Q7LFX5 561 aaPredicted RBP14.33□□□□□ -0.12
USP15-206ENST00000546718 POLNQ7Z5Q5 900 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 NLRP8Q86W28 1048 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 ATPAF2Q8N5M1 289 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 ESX1Q8N693 406 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 WDR24Q96S15 920 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 TBC1D10AQ9BXI6 508 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
USP15-206ENST00000546718 VPS18Q9P253 973 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 LIMA1Q9UHB6 759 aaKnown RBP14.33□□□□□ -0.12
USP15-206ENST00000546718 ZNHIT2Q9UHR6 403 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
USP15-206ENST00000546718 KCTD3Q9Y597 815 aa14.33□□□□□ -0.12
USP15-206ENST00000546718 ICE1Q9Y2F5 2266 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 H3BRJ5 948 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 ANKRD34CP0C6C1 535 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 ATP1A3P13637 1013 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 ACP5P13686 325 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 ZNF30P17039 623 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 UQCRFS1P47985 274 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 CDH6P55285 790 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 SEPT6Q14141 434 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 MAP7Q14244 749 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 BBS5Q8N3I7 341 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 ULBP3Q9BZM4 244 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 NT5MQ9NPB1 228 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP15-206ENST00000546718 OGFRQ9NZT2 677 aa14.32□□□□□ -0.12
USP15-206ENST00000546718 FADS2P1A8MWK0 482 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 ASMTLO95671 621 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 PYGLP06737 847 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 KRT7P08729 469 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 F3P13726 295 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 ARL4AP40617 200 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
USP15-206ENST00000546718 C4orf17Q53FE4 359 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 TXNRD3NBQ6F5E7 133 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 ALG1LQ6GMV1 187 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 TCTN3Q6NUS6 607 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 TMEM135Q86UB9 458 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 TEX26Q8N6G2 289 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 HSPH1Q92598 858 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 HERPUD2Q9BSE4 406 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 TDRD1Q9BXT4 1180 aaKnown RBP14.31□□□□□ -0.12
USP15-206ENST00000546718 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 STN1Q9H668 368 aaKnown RBP14.31□□□□□ -0.12
USP15-206ENST00000546718 CNOT8Q9UFF9 292 aaKnown RBP14.31□□□□□ -0.12
USP15-206ENST00000546718 CROTQ9UKG9 612 aa14.31□□□□□ -0.12
USP15-206ENST00000546718 KIR2DS5A0A0G2JLQ3 304 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 A0A0G2JNG1 304 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 LILRA5A6NI73 299 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 KIR2DS3K7RE56 304 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 SNX2O60749 519 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 CLDN7O95471 211 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 PRLP01236 227 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 C9P02748 559 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 PDGFAP04085 211 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 PCK1P35558 622 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 DLSTP36957 453 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 SH3BP2P78314 561 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 ERV3-1Q14264 604 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 KIR2DS5Q14953 304 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 HENMT1Q5T8I9 393 aaKnown RBP14.3□□□□□ -0.12
USP15-206ENST00000546718 E4F1Q66K89 784 aaPredicted RBP14.3□□□□□ -0.12
USP15-206ENST00000546718 PPP1R2P3Q6NXS1 205 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 LYSMD3Q7Z3D4 306 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 SLC9B2Q86UD5 537 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 ATCAYQ86WG3 371 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP15-206ENST00000546718 GALNT6Q8NCL4 622 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 SH3KBP1Q96B97 665 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 C9orf72Q96LT7 481 aa14.3□□□□□ -0.12
USP15-206ENST00000546718 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
USP15-206ENST00000546718 EPB41L1Q9H4G0 881 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms