RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IGLV3-16A0A075B6K0 115 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 IGLON5A6NGN9 336 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 H3BMM5 538 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 GAPDHSO14556 408 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 MAP2K7O14733 419 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 NDUFS2O75306 463 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 KRT38O76015 456 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 GSTM1P09488 218 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 RALBP11234 206 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 HNRNPA2B1P22626 353 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 PMLP29590 882 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 SPRP35270 261 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 MSH2P43246 934 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 GSTM4Q03013 218 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 FAM151BQ6UXP7 276 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 CCDC91Q7Z6B0 441 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 PHYKPLQ8IUZ5 450 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 CTAGE3PQ8IX95 158 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 RBFAQ8N0V3 343 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 TMEM105Q8N8V8 129 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 NELL1Q92832 810 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 ZNF514Q96K75 400 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 PAFAH2Q99487 392 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 TRIM56Q9BRZ2 755 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 SPATA16Q9BXB7 569 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 STMN4Q9H169 189 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 FBXO5Q9UKT4 447 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 ZFR2Q9UPR6 939 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 PLAAQ9Y263 795 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 PCDHB1Q9Y5F3 818 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 HS3ST3A1Q9Y663 406 aa15.91■□□□□ 0.14
PRPF40A-212ENST00000545856 FANCMQ8IYD8 2048 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 BPTFQ12830 3046 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 KLHL33A6NCF5 533 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 GOLGA6L10A6NI86 522 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 A8MX80 341 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 PRAMEF26H0Y7S4 382 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 BUD23O43709 281 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 KRT37O76014 449 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ERVK-10P10266 1014 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ZNF7P17097 686 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 CD9P21926 228 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 RPS3P23396 243 aaKnown RBP eCLIP15.9■□□□□ 0.143e-6■□□□□ 11.1
PRPF40A-212ENST00000545856 ACRV1P26436 265 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ATP5DP30049 168 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 AKT2P31751 481 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 TRIM23P36406 574 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 DPP6P42658 865 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 NSG1P42857 185 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 SLC1A2P43004 574 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 GPR1P46091 355 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 CD151P48509 253 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 YPEL5P62699 121 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 TMPRSS15P98073 1019 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 PTPRRQ15256 657 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ZRANB3Q5FWF4 1079 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 SEL1L3Q68CR1 1132 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ADGRD1Q6QNK2 874 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 CAPN12Q6ZSI9 719 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 PTAR1Q7Z6K3 402 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 FAM124AQ86V42 546 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 OTUD6BQ8N6M0 293 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 TP53I13Q8NBR0 393 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 BTN2A2Q8WVV5 523 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 GLYATL1Q969I3 302 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 CENPTQ96BT3 561 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 COPS8Q99627 209 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 RIOK2Q9BVS4 552 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 RHOJQ9H4E5 214 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 IARS2Q9NSE4 1012 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 ZDHHC3Q9NYG2 299 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 NFS1Q9Y697 457 aa15.9■□□□□ 0.14
PRPF40A-212ENST00000545856 IQANK1A0A1B0GTG1 560 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 CCDC78A2IDD5 438 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 PRR33A8MZF0 331 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 FPGTO14772 594 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 RASGRF2O14827 1237 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 VEGFDO43915 354 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 GPR37L1O60883 481 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 NDUFS3O75489 264 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 AP2A2O94973 939 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 ESR1P03372 595 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 KELP23276 732 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 AVPR2P30518 371 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 OVGP1Q12889 678 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 CHRNA6Q15825 494 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 ATP13A5Q4VNC0 1218 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 PNCKQ6P2M8 343 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 PPM1NQ8N819 430 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 ERLEC1Q96DZ1 483 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 RBBP8Q99708 897 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 MCMBPQ9BTE3 642 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 TEX101Q9BY14 249 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 TPSD1Q9BZJ3 242 aa15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 SUDS3Q9H7L9 328 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 PHPT1Q9NRX4 125 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-212ENST00000545856 LGALS13Q9UHV8 139 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms