RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SULT2A1Q06520 285 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 MESP2Q0VG99 397 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 SEMA3BQ13214 749 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 FZD5Q13467 585 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 POLD3Q15054 466 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 EIF4HQ15056 248 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 GEN1Q17RS7 908 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 FUT11Q495W5 492 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CYP27C1Q4G0S4 372 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PITRM1Q5JRX3 1037 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF362Q5T0B9 420 aaPredicted RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 MBLAC2Q68D91 279 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 RPUSD3Q6P087 351 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 OGFOD3Q6PK18 319 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF765Q7L2R6 523 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PEX26Q7Z412 305 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 TRMT11Q7Z4G4 463 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 KDELC2Q7Z4H8 507 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CDH24Q86UP0 819 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 NLRP14Q86W24 1093 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 SFTPA1Q8IWL2 248 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 RTL3Q8N8U3 475 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 RPLP0P6Q8NHW5 317 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PCDH19Q8TAB3 1148 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CLDN23Q96B33 292 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ALS2CR12Q96Q35 445 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 FEM1AQ9BSK4 669 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CALN1Q9BXU9 219 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 MAK16Q9BXY0 300 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 GOLPH3Q9H4A6 298 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 PCDH18Q9HCL0 1135 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM248Q9NWD8 314 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ELOVL2Q9NXB9 296 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 CWC15Q9P013 229 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 DNAI1Q9UI46 699 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 VPS28Q9UK41 221 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 AMFRQ9UKV5 643 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 TBC1D30Q9Y2I9 924 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 RRP15Q9Y3B9 282 aaKnown RBP5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ZNF711Q9Y462 761 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 EPG5Q9HCE0 2579 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 COL4A2P08572 1712 aa5.17□□□□□ -1.58
CLIP1-217ENST00000543205 ILVBLA1L0T0 632 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 LRRD1A4D1F6 860 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 GRID2IPA4D2P6 1211 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 WASH4PA8MWX3 477 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NPC1O15118 1278 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RAMP2O60895 175 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 KLF8O95600 359 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ERCC2P18074 760 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 KDELR1P24390 212 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 AVPR2P30518 371 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NNMTP40261 264 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 PLK1P53350 603 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ST8SIA6P61647 398 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ECT2LQ008S8 904 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 GNA12Q03113 381 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SCARB2Q14108 478 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DPYSL3Q14195 570 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TOR2AQ5JU69 321 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ARMC4Q5T2S8 1044 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 Q6ZS52 159 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 OVCH1Q7RTY7 1134 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ADIPOR2Q86V24 386 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 APCDD1Q8J025 514 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ALLCQ8N6M5 410 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 UBL4BQ8N7F7 174 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TMEM105Q8N8V8 129 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 TXNDC5Q8NBS9 432 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SORCS1Q8WY21 1168 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RAPGEF5Q92565 580 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 HIC2Q96JB3 615 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 LMLNQ96KR4 655 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CSPG4P5Q96PW8 444 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ATP13A1Q9HD20 1204 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 HAUS2Q9NVX0 235 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SPATA6Q9NWH7 488 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 KIF17Q9P2E2 1029 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RCOR3Q9P2K3 495 aaPredicted RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SLC25A13Q9UJS0 675 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SLC13A4Q9UKG4 626 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 HPCAL4Q9UM19 191 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 NEU3Q9UQ49 428 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 COL4A3Q01955 1670 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 A0A0D9SEW6 157 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CCDC66A2RUB6 948 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 ARHGAP42A6NI28 874 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 RGS13O14921 159 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SLC7A4O43246 635 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SYNCRIPO60506 623 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 PPM1BO75688 479 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 GJB3O75712 270 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 FTCDO95954 541 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 SRPRAP08240 638 aaKnown RBP5.16□□□□□ -1.58
CLIP1-217ENST00000543205 CD48P09326 243 aa5.16□□□□□ -1.58
CLIP1-217ENST00000543205 DLDP09622 509 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms