RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 LDB2O43679 373 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 LDOC1O95751 146 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-216ENST00000543170 GAS8O95995 478 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 APRTP07741 180 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 CTSEP14091 401 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 TPSB2P20231 275 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 HADHAP40939 763 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 MAGEA6P43360 314 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 BASP1P80723 227 aaKnown RBP18.24■□□□□ 0.51
COPS7A-216ENST00000543170 SIM1P81133 766 aaPredicted RBP18.24■□□□□ 0.51
COPS7A-216ENST00000543170 ITGA9Q13797 1035 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 TPSAB1Q15661 275 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 ZCCHC8Q6NZY4 707 aaKnown RBP18.24■□□□□ 0.51
COPS7A-216ENST00000543170 PPP1R21Q6ZMI0 780 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 NYAP1Q6ZVC0 841 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 TRIM74Q86UV6 250 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 GKN2Q86XP6 184 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 OR52K1Q8NGK4 314 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 RMI1Q9H9A7 625 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 CARS2Q9HA77 564 aaKnown RBP18.24■□□□□ 0.51
COPS7A-216ENST00000543170 CASS4Q9NQ75 786 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 NCKIPSDQ9NZQ3 722 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 APPL1Q9UKG1 709 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 SUFUQ9UMX1 484 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 NEU2Q9Y3R4 380 aa18.24■□□□□ 0.51
COPS7A-216ENST00000543170 PLXNB3Q9ULL4 1909 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 SPTBN2O15020 2390 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 SPAARA0A1B0GVQ0 90 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 H7C0S8 307 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 AP3B1O00203 1094 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 GAPDHSO14556 408 aaPredicted RBP18.23■□□□□ 0.51
COPS7A-216ENST00000543170 SIGLEC6O43699 453 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 DKK1O94907 266 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 KRT14P02533 472 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 ANXA6P08133 673 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 PSMA3P25788 255 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 LAMB3Q13751 1172 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 C6orf132Q5T0Z8 1188 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 DOK6Q6PKX4 331 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 RD3Q7Z3Z2 195 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 DNAAF3Q8N9W5 541 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 OR4K2Q8NGD2 314 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 RUNDC3BQ96NL0 473 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 RANBP9Q96S59 729 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 BOCQ9BWV1 1114 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 EVA1BQ9NVM1 165 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 TOR4AQ9NXH8 423 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 PCDHGA1Q9Y5H4 931 aa18.23■□□□□ 0.51
COPS7A-216ENST00000543170 OAS3Q9Y6K5 1087 aaKnown RBP18.23■□□□□ 0.51
COPS7A-216ENST00000543170 GOLGA4Q13439 2230 aaKnown RBP18.23■□□□□ 0.51
COPS7A-216ENST00000543170 ZFC3H1O60293 1989 aaKnown RBP18.22■□□□□ 0.51
COPS7A-216ENST00000543170 BUD23O43709 281 aaKnown RBP18.22■□□□□ 0.51
COPS7A-216ENST00000543170 DNAJC6O75061 913 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 SLC25A14O95258 325 aaPredicted RBP18.22■□□□□ 0.51
COPS7A-216ENST00000543170 ECEL1O95672 775 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 FUCA1P04066 466 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 CKMT2P17540 419 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 KCNA4P22459 653 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 PAFAH1B1P43034 410 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 C1orf61Q13536 156 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 LRP8Q14114 963 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 POU6F1Q14863 301 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 DEFB133Q30KQ1 61 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 ATP13A5Q4VNC0 1218 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 FAM151BQ6UXP7 276 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 GPBAR1Q8TDU6 330 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 STYXQ8WUJ0 223 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 SCG3Q8WXD2 468 aaKnown RBP18.22■□□□□ 0.51
COPS7A-216ENST00000543170 CAPZA3Q96KX2 299 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 OR2M4Q96R27 311 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 GSDMCQ9BYG8 508 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 TMEM168Q9H0V1 697 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 TRIM39Q9HCM9 518 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 PCYOX1Q9UHG3 505 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 MOSPD1Q9UJG1 213 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 RIMKLBQ9ULI2 386 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 APOBEC2Q9Y235 224 aaKnown RBP18.22■□□□□ 0.51
COPS7A-216ENST00000543170 TMEM98Q9Y2Y6 226 aa18.22■□□□□ 0.51
COPS7A-216ENST00000543170 HEATR9A2RTY3 570 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 MROH6A6NGR9 719 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 CCDC188H7C350 402 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 YY2O15391 372 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 VEGFDO43915 354 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 TRIM16O95361 564 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 PRAMEF1O95521 474 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ASMTLO95671 621 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 CELA2BP08218 269 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ADRB1P08588 477 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 FTH1P19P0C7X4 201 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 CKMT1AP12532 417 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ACP1P24666 158 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 CASQ1P31415 396 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 GNPDA1P46926 289 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 POLD2P49005 469 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ACADVLP49748 655 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ILF3Q12906 894 aaKnown RBP eCLIP18.21■□□□□ 0.51
COPS7A-216ENST00000543170 GPS1Q13098 491 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 ILKQ13418 452 aa18.21■□□□□ 0.51
COPS7A-216ENST00000543170 PEX6Q13608 980 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms