RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MARC1Q5VT66 337 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 USP51Q70EK9 711 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
DDX11-223ENST00000542838 TANKQ92844 425 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 LPPQ93052 612 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 RNF145Q96MT1 663 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
DDX11-223ENST00000542838 NOL6Q9H6R4 1146 aaKnown RBP12.87□□□□□ -0.35
DDX11-223ENST00000542838 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 TMEM9Q9P0T7 183 aa12.87□□□□□ -0.35
DDX11-223ENST00000542838 ASPDHA6ND91 283 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 CCDC154A6NI56 674 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 VPS4BO75351 444 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 CYBBP04839 570 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 MMP2P08253 660 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 ZNF12P17014 697 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ZNF37AP17032 561 aaPredicted RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 CCNA2P20248 432 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 MATN1P21941 496 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ELK4P28324 431 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 POLR2IP36954 125 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 PGFP49763 221 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 RAB15P59190 212 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ADAM17P78536 824 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 TIAL1Q01085 375 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX11-223ENST00000542838 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX11-223ENST00000542838 NFATC3Q12968 1075 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 IHHQ14623 411 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 PTPRCAPQ14761 206 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 TGFBIQ15582 683 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 PAN2Q504Q3 1202 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 NANOGP8Q6NSW7 305 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 DCDC5Q6ZRR9 648 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ZC3H7AQ8IWR0 971 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 OSCP1Q8WVF1 389 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ACDQ96AP0 544 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ATOH8Q96SQ7 321 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 ADARB2Q9NS39 739 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 DYTNA2CJ06 578 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 KPNA6O60684 536 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 GOT2P00505 430 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 GJA5P36382 358 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 SCML4Q8N228 414 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 TSPEARQ8WU66 669 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 HMCESQ96FZ2 354 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 CYP2S1Q96SQ9 504 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 BDH2Q9BUT1 245 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 CHID1Q9BWS9 393 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 SMOC2Q9H3U7 446 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 SLAMF8Q9P0V8 285 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 UXTQ9UBK9 157 aaPredicted RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
DDX11-223ENST00000542838 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
DDX11-223ENST00000542838 TRIM64BA6NI03 449 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 J3QRK9 145 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 CD3EAPO15446 510 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 B4GAT1O43505 415 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 LDB2O43679 373 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 PSEN2P49810 448 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 BMXP51813 675 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 UFM1P61960 85 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 LCP2Q13094 533 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 RCAN2Q14206 197 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 SPATA19Q7Z5L4 167 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 KIAA2013Q8IYS2 634 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 CENPSQ8N2Z9 138 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 FBXO39Q8N4B4 442 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 OR13F1Q8NGS4 319 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 RHEBL1Q8TAI7 183 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 MUS81Q96NY9 551 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 TMEM209Q96SK2 561 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 TFB2MQ9H5Q4 396 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 SP110Q9HB58 689 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 COL4A4P53420 1690 aaPredicted RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 CPNE6O95741 557 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 ODC1P11926 461 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 SCNN1GP51170 649 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 SEMA3AQ14563 771 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 PYCR3Q53H96 274 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 PRAMEF19Q5SWL8 479 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 TMEM214Q6NUQ4 689 aaKnown RBP12.85□□□□□ -0.35
DDX11-223ENST00000542838 ZNF773Q6PK81 442 aa12.85□□□□□ -0.35
DDX11-223ENST00000542838 SCIMPQ6UWF3 145 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms