RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MT-CO3P00414 261 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PTMAP06454 111 aaKnown RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 CTBSQ01459 385 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 ILF3Q12906 894 aaKnown RBP eCLIP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 RPS6KA1Q15418 735 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 DOK6Q6PKX4 331 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 SLC13A5Q86YT5 568 aaPredicted RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 SFTPA2Q8IWL1 248 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 TRAM1L1Q8N609 369 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 MAPK15Q8TD08 544 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 DTX3LQ8TDB6 740 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PPP1R2P1Q96PQ5 205 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PLEKHG4BQ96PX9 1271 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 GSDMCQ9BYG8 508 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 CARD9Q9H257 536 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 SPATS2LQ9NUQ6 558 aaKnown RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 IL17CQ9P0M4 197 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 SIRPGQ9P1W8 387 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 GULP1Q9UBP9 304 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 DKK4Q9UBT3 224 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 AAR2Q9Y312 384 aaKnown RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 PCYT1BQ9Y5K3 369 aaPredicted RBP15.33■□□□□ 0.04
ECHDC2-223ENST00000542552 ATP1A1P05023 1023 aaKnown RBP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 MSLNQ13421 630 aaPredicted RBP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 HLTFQ14527 1009 aaKnown RBP eCLIP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 PRPSAP1Q14558 356 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 OASLQ15646 514 aaKnown RBP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ST3GAL2Q16842 350 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 CERCAMQ5T4B2 595 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ALS2CLQ60I27 953 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 DENND5AQ6IQ26 1287 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 FAM71DQ8N9W8 422 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 OR6C4Q8NGE1 309 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 RTP4Q96DX8 246 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 OR2M4Q96R27 311 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 TMEM121Q9BTD3 319 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 FICDQ9BVA6 458 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 FRMD8P1Q9BZ68 369 aaPredicted RBP15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ABCG4Q9H172 646 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 RMI1Q9H9A7 625 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ARNT2Q9HBZ2 717 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 TAAR2Q9P1P5 351 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 RABGEF1Q9UJ41 708 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 APPL1Q9UKG1 709 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 PLEKHM1Q9Y4G2 1056 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ITPR1Q14643 2758 aa15.32■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNF106Q9H2Y7 1883 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 APC2O95996 2303 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 CASC3O15234 703 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 LIASO43766 372 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 NRDCO43847 1150 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 METTL18O95568 372 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 SLC4A1P02730 911 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 AK4P27144 223 aaPredicted RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 GDF10P55107 478 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 LRP8Q14114 963 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 PARP6Q2NL67 630 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 C14orf28Q4W4Y0 310 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 ZNF569Q5MCW4 686 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 MARK2Q7KZI7 788 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 GALNT13Q8IUC8 556 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 WDR48Q8TAF3 677 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 BLOC1S5Q8TDH9 187 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 ATG4AQ8WYN0 398 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 ZCCHC14Q8WYQ9 949 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 GLYATL1Q969I3 302 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 CCDC74AQ96AQ1 378 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 VPS35Q96QK1 796 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 CCDC3Q9BQI4 270 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 NRSN2Q9GZP1 204 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 DPEP2Q9H4A9 486 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 TRIM39Q9HCM9 518 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 IL26Q9NPH9 171 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 GPSM3Q9Y4H4 160 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 CACNA1BQ00975 2339 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 PKD1L2Q7Z442 2459 aa15.31■□□□□ 0.04
ECHDC2-223ENST00000542552 CFAP47Q6ZTR5 3102 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 B4DGG1 531 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 GPR89AB7ZAQ6 455 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 TAF4O00268 1085 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 NTN3O00634 580 aaPredicted RBP15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 GAPDHSO14556 408 aaPredicted RBP15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 NUAK1O60285 661 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 PPFIA2O75334 1257 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 TCEA3O75764 348 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 ASMTLO95671 621 aa15.3■□□□□ 0.04
ECHDC2-223ENST00000542552 GPR89BP0CG08 455 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms