RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 SLC7A2P52569 658 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TBX4P57082 545 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 MAXP61244 160 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6V0D1P61421 351 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TUBA4AP68366 448 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PRKCQQ04759 706 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 FOXM1Q08050 763 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 LAMB3Q13751 1172 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 OR4D1Q15615 310 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TYSND1Q2T9J0 566 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PAN2Q504Q3 1202 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 ALFQ53S48 1182 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 MTX3Q5HYI7 312 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 INTS11Q5TA45 600 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 CLEC6AQ6EIG7 209 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 LCN8Q6JVE9 175 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 ARHGAP22Q7Z5H3 698 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PTAR1Q7Z6K3 402 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PIM3Q86V86 326 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 DHFR2Q86XF0 187 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 AQP12AQ8IXF9 295 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 NUP93Q8N1F7 819 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PNPLA1Q8N8W4 532 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PCYOX1LQ8NBM8 494 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TRPV1Q8NER1 839 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TSPAN14Q8NG11 270 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 OR9I1Q8NGQ6 314 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 OR2T34Q8NGX1 318 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 OR2T3Q8NH03 318 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 HM13Q8TCT9 377 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TSPEARQ8WU66 669 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TFAP2CQ92754 450 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PSMG2Q969U7 264 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 FUBP3Q96I24 572 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 HIC2Q96JB3 615 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 FEM1CQ96JP0 617 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 KLHL5Q96PQ7 755 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 ATOH8Q96SQ7 321 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 HAUS8Q9BT25 410 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 EFHD1Q9BUP0 239 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 C1QTNF3Q9BXJ4 246 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 GRIP2Q9C0E4 1043 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 ZCWPW1Q9H0M4 648 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 UPF3AQ9H1J1 476 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TUBB1Q9H4B7 451 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 TFB2MQ9H5Q4 396 aaKnown RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 SDR39U1Q9NRG7 319 aaPredicted RBP5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 RGS18Q9NS28 235 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PNPLA3Q9NST1 481 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 THEGQ9P2T0 379 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 HSFX1Q9UBD0 423 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 NUDT5Q9UKK9 219 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 PADI3Q9ULW8 664 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 FIS1Q9Y3D6 152 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 KCTD3Q9Y597 815 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 SQORQ9Y6N5 450 aa5.18□□□□□ -1.58
ATPAF1-212ENST00000542495 A0A0J9YYE9 177 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TTC24A2A3L6 582 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CCDC162PA2VCL2 907 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 OR51F1A6NGY5 319 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 F8W810 466 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 H3BMM5 538 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TMEM189-UBE2V1I3L0A0 370 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PLOD2O00469 737 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CCL22O00626 93 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CDK2AP1O14519 115 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 AZIN1O14977 448 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CD3EAPO15446 510 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 HNRNPRO43390 633 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 KLK8O60259 260 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 VPS4BO75351 444 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 RPP40O75818 363 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TMCC1O94876 653 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CSPG5O95196 566 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 BMP10O95393 424 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 MOCS2O96007 188 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 GOT2P00505 430 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 IGLV3-27P01718 113 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PDGFAP04085 211 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 FGF1P05230 155 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6V1B1P15313 513 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF37AP17032 561 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 HLA-DPA1P20036 260 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CAPN3P20807 821 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC6A2P23975 617 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CD52P31358 61 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC5A2P31639 672 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PBX3P40426 434 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 ZFP36L2P47974 494 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 TM4SF4P48230 202 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 CDK9P50750 372 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 YBEYP58557 167 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 STX1BP61266 288 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 PRAMEP78395 509 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 YWHAHQ04917 246 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SREBF2Q12772 1141 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 BNIP2Q12982 314 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 GRIK2Q13002 908 aa5.17□□□□□ -1.58
ATPAF1-212ENST00000542495 SERINC3Q13530 473 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms