RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 RBM41Q96IZ5 413 aaKnown RBP16.29■□□□□ 0.2
CCND1-205ENST00000542367 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 PRORYQ9H606 182 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 VPS18Q9P253 973 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 ZNF711Q9Y462 761 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 PRKAB1Q9Y478 270 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 PCYT1BQ9Y5K3 369 aaPredicted RBP16.29■□□□□ 0.2
CCND1-205ENST00000542367 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 ZFYVE26Q68DK2 2539 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 CDRT15L2A8MXV6 281 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 PLD2O14939 933 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 DNAJC6O75061 913 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
CCND1-205ENST00000542367 NDST3O95803 873 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 ALDH4A1P30038 563 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 CCKBRP32239 447 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
CCND1-205ENST00000542367 TLE3Q04726 772 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 EIF3IQ13347 325 aaKnown RBP16.28■□□□□ 0.2
CCND1-205ENST00000542367 BIRC2Q13490 618 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 ALS2CLQ60I27 953 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 RAD9BQ6WBX8 426 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 RAB11FIP2Q7L804 512 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 PID1Q7Z2X4 250 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 GPR26Q8NDV2 337 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 SPATA16Q9BXB7 569 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 GPR63Q9BZJ6 419 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 FAM153AQ9UHL3 310 aa16.28■□□□□ 0.2
CCND1-205ENST00000542367 REXO2Q9Y3B8 237 aaKnown RBP16.28■□□□□ 0.2
CCND1-205ENST00000542367 TRBV23OR9-2A0A075B6M9 112 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 PPM1DO15297 605 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 MTSS1O43312 755 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 SLC4A1P02730 911 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 NFKB1P19838 968 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 ZFP36L1Q07352 338 aaKnown RBP16.27■□□□□ 0.2
CCND1-205ENST00000542367 LRP8Q14114 963 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 NR1D2Q14995 579 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 PPP2R5EQ16537 467 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 AMZ1Q400G9 498 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 CHST15Q7LFX5 561 aaPredicted RBP16.27■□□□□ 0.2
CCND1-205ENST00000542367 TMPRSS9Q7Z410 1059 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 ZNF438Q7Z4V0 828 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 ZNF567Q8N184 647 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 KCNE4Q8WWG9 221 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 CALR3Q96L12 384 aaKnown RBP16.27■□□□□ 0.2
CCND1-205ENST00000542367 RDH14Q9HBH5 336 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 ARFGAP3Q9NP61 516 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
CCND1-205ENST00000542367 PCDHA3Q9Y5H8 950 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 SPO11Q9Y5K1 396 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 ITPR1Q14643 2758 aa16.27■□□□□ 0.2
CCND1-205ENST00000542367 CACNA1GO43497 2377 aa16.27■□□□□ 0.19
CCND1-205ENST00000542367 HACD1B0YJ81 288 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 F5H423 210 aaPredicted RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 AGRPO00253 132 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 AURKAO14965 403 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 KLK10O43240 276 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ZW10O43264 779 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 CPNE6O95741 557 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ITGA2BP08514 1039 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 HGFP14210 728 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 UGT1A5P35504 534 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 MLLT3P42568 568 aaPredicted RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 GPR3P46089 330 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 WNT3AP56704 352 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 COPS2P61201 443 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 MAP9Q49MG5 647 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 ZNF648Q5T619 568 aaPredicted RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 KDELC1Q6UW63 502 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 BBS12Q6ZW61 710 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 PIM3Q86V86 326 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 SLITRK4Q8IW52 837 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ACRBPQ8NEB7 543 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 FCRL3Q96P31 734 aaPredicted RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCND1-205ENST00000542367 SRPK1Q96SB4 655 aaKnown RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 VAT1Q99536 393 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ZSCAN5AQ9BUG6 496 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 DPH1Q9BZG8 443 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 LACRTQ9GZZ8 138 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 CARD9Q9H257 536 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 SEMA6CQ9H3T2 930 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 RMI1Q9H9A7 625 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 RAD18Q9NS91 495 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ATXN10Q9UBB4 475 aa16.26■□□□□ 0.19
CCND1-205ENST00000542367 ZFC3H1O60293 1989 aaKnown RBP16.26■□□□□ 0.19
CCND1-205ENST00000542367 LOC285095A0A1B0GVY8 99 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 BTNL10A8MVZ5 291 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 H7C0C1 242 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 APOC4-APOC2K7ER74 178 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 GRID2O43424 1007 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 NUAK1O60285 661 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 SLC25A14O95258 325 aaPredicted RBP16.25■□□□□ 0.19
CCND1-205ENST00000542367 EML2O95834 649 aa16.25■□□□□ 0.19
CCND1-205ENST00000542367 APOC2P02655 101 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms