RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 ECHDC3Q96DC8 303 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 WDR55Q9H6Y2 383 aaPredicted RBP14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 HCFC1R1Q9NWW0 138 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 H3BNX3 289 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 ARSDP51689 593 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 RAD51Q06609 339 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 IZUMO2Q6UXV1 221 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 TMEM184AQ6ZMB5 413 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 KDELC2Q7Z4H8 507 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 PGAM4Q8N0Y7 254 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 PELI3Q8N2H9 469 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 TXNDC5Q8NBS9 432 aaKnown RBP14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 GRIN3AQ8TCU5 1115 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 LRIG1Q96JA1 1093 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 TBATAQ96M53 351 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 NSMCE3Q96MG7 304 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 SPO11Q9Y5K1 396 aa14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
SPOCK3-226ENST00000541354 SRPRAP08240 638 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PABPC1P11940 636 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 IRS1P35568 1242 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PSMD8P48556 350 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 KCNC3Q14003 757 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 CYLC2Q14093 348 aaPredicted RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PIGGQ5H8A4 983 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 HPS6Q86YV9 775 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 SLC22A9Q8IVM8 553 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 HOMEZQ8IX15 550 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 MDGA1Q8NFP4 955 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 TCEAL4Q96EI5 215 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 AARSD1Q9BTE6 412 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 SYTL2Q9HCH5 934 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 UTP6Q9NYH9 597 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PDP2Q9P2J9 529 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 ZNF711Q9Y462 761 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 ARL5AQ9Y689 179 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 CAPNS1P04632 268 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 SRCP12931 536 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PAX7P23759 505 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 EPHA3P29320 983 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 GLRBP48167 497 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 EPHB1P54762 984 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 NFKB2Q00653 900 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 CRY1Q16526 586 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 CNSTQ6PJW8 725 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 DSELQ8IZU8 1212 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 RHEBL1Q8TAI7 183 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 SPATS2LQ9NUQ6 558 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 IL17CQ9P0M4 197 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 C6orf203Q9P0P8 240 aaPredicted RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 SLC27A6Q9Y2P4 619 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 PKP3Q9Y446 797 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 HCFC2Q9Y5Z7 792 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 ATG2AQ2TAZ0 1938 aa14.59□□□□□ -0.07
SPOCK3-226ENST00000541354 A0A0J9YYE9 177 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 CAPN8A6NHC0 703 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 SDHDO14521 159 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 STX7O15400 261 aaKnown RBP14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 RFPL2O75678 378 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 PDE5AO76074 875 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 POP4O95707 220 aaKnown RBP14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 TRBC1P01850 177 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 RPS3P23396 243 aaKnown RBP eCLIP14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 CD70P32970 193 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 INHBCP55103 352 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 CACNG1Q06432 222 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 ZNF423Q2M1K9 1284 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 SLC5A9Q2M3M2 681 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 C22orf39Q6P5X5 142 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 SNX32Q86XE0 403 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 NUF2Q9BZD4 464 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 BCAP29Q9UHQ4 241 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 APPL1Q9UKG1 709 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 ADAMTS6Q9UKP5 1117 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 FCF1Q9Y324 198 aaKnown RBP14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 PCDHB1Q9Y5F3 818 aa14.58□□□□□ -0.07
SPOCK3-226ENST00000541354 TSPAN11A1L157 253 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 ZNF821O75541 412 aaPredicted RBP14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 BAG2O95816 211 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 CCR10P46092 362 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 MYLK3Q32MK0 819 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 LINGO4Q6UY18 593 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 TRIM67Q6ZTA4 783 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 PTAR1Q7Z6K3 402 aaPredicted RBP14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 SLC26A7Q8TE54 656 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 PYDC1Q8WXC3 89 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 BTBD9Q96Q07 612 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 TRMOQ9BU70 441 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 KLHL4Q9C0H6 718 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 MEAF6Q9HAF1 191 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 RAD18Q9NS91 495 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 GDE1Q9NZC3 331 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 PSMD13Q9UNM6 376 aa14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 MRPS23Q9Y3D9 190 aaKnown RBP14.58□□□□□ -0.08
SPOCK3-226ENST00000541354 PCDHGC4Q9Y5F7 938 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms