RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 COQ10BQ9H8M1 238 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 MEAF6Q9HAF1 191 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 CXorf21Q9HAI6 301 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 UGT1A7Q9HAW7 530 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 UGT1A10Q9HAW8 530 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 UGT1A8Q9HAW9 530 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 HMG20AQ9NP66 347 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SLC2A4RGQ9NR83 387 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 DTLQ9NZJ0 730 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GMIPQ9P107 970 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 KLHL8Q9P2G9 620 aaPredicted RBP10.38□□□□□ -0.75
CHFR-219ENST00000541341 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
CHFR-219ENST00000541341 GREB1Q4ZG55 1949 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 DENND4CQ5VZ89 1909 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 IFRD1O00458 451 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 TRIM24O15164 1050 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 SPTLC1O15269 473 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 LAMTOR5O43504 91 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 AKAP10O43572 662 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NRP2O60462 931 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 XYLBO75191 536 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PIAS1O75925 651 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 B3GAT3O94766 335 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CYP11A1P05108 521 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CEBPBP17676 345 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CCNA2P20248 432 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 MATKP42679 507 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CD151P48509 253 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TMED10P49755 219 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 STARD6P59095 220 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 RAB10P61026 200 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 FOXK2Q01167 660 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CREMQ03060 361 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TNK2Q07912 1038 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 MERTKQ12866 999 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 ELAVL2Q12926 359 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 USP4Q13107 963 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 FASTKQ14296 549 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 USP10Q14694 798 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 LPAL2Q16609 132 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 RSPO4Q2I0M5 234 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 GOLGA7BQ2TAP0 167 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 ARL13AQ5H913 290 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 NHSL2Q5HYW2 709 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PCID2Q5JVF3 399 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 RBM48Q5RL73 367 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 CCNYL2Q5T2Q4 361 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NCBP2-AS2Q69YL0 99 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PID1Q7Z2X4 250 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 RAB44Q7Z6P3 723 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 AMIGO2Q86SJ2 522 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PROSER1Q86XN7 944 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 CNTN4Q8IWV2 1026 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NPAS3Q8IXF0 933 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 SFRP1Q8N474 314 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 DHRSXQ8N5I4 330 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 MINDY1Q8N5J2 469 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TOP6BLQ8N6T0 577 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NUP210Q8TEM1 1887 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NTAN1Q96AB6 310 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TCEAL4Q96EI5 215 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TMA16Q96EY4 203 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 P2RY11Q96G91 374 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TNIP3Q96KP6 325 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 OR52B2Q96RD2 323 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 BDH2Q9BUT1 245 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 PAIP1Q9H074 479 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 GPN2Q9H9Y4 310 aaPredicted RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 HEBP1Q9NRV9 189 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 OLAHQ9NV23 265 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 INTS10Q9NVR2 710 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 ACTR3BQ9P1U1 418 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 TMEM181Q9P2C4 612 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NCDNQ9UBB6 729 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 NDRG2Q9UN36 371 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 COQ6Q9Y2Z9 468 aa10.37□□□□□ -0.75
CHFR-219ENST00000541341 MRPS23Q9Y3D9 190 aaKnown RBP10.37□□□□□ -0.75
CHFR-219ENST00000541341 OBSL1O75147 1896 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 EML5Q05BV3 1969 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RNF103-CHMP3A0A140T963 221 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 TCAF2A6NFQ2 919 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 CFAP99D6REC4 459 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 MRASO14807 208 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 SYN3O14994 580 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 GRID2O43424 1007 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 GMNNO75496 209 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 DAB1O75553 588 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RNASEH2AO75792 299 aaKnown RBP10.36□□□□□ -0.75
CHFR-219ENST00000541341 SUPT7LO94864 414 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 RASAL1O95294 804 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 BCL10O95999 233 aa10.36□□□□□ -0.75
CHFR-219ENST00000541341 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHFR-219ENST00000541341 GJA1P17302 382 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms