RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ZFP57Q9NU63 452 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 ABCF3Q9NUQ8 709 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 PADI3Q9ULW8 664 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 KLHL20Q9Y2M5 609 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 KCNE2Q9Y6J6 123 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 MAU2Q9Y6X3 613 aa5.85□□□□□ -1.47
YBX3-210ENST00000540975 FAM237BA0A1B0GVD1 139 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 J3KRW8 73 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 M0QZ24 198 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 LINC01565O15544 149 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 SP1P08047 785 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 HSPA1AP0DMV8 641 aaKnown RBP5.84□□□□□ -1.47
YBX3-210ENST00000540975 HSPA1BP0DMV9 641 aaKnown RBP5.84□□□□□ -1.47
YBX3-210ENST00000540975 UBA1P22314 1058 aaKnown RBP5.84□□□□□ -1.47
YBX3-210ENST00000540975 MPP1Q00013 466 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 CPLX4Q7Z7G2 160 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 ACVR1CQ8NER5 493 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 THAP6Q8TBB0 222 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 HES6Q96HZ4 224 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 WDFY2Q96P53 400 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 UNC45AQ9H3U1 944 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 OR14J1Q9UGF5 321 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 FBXL2Q9UKC9 423 aa5.84□□□□□ -1.47
YBX3-210ENST00000540975 P2RY10O00398 339 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 KCNN4O15554 427 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 SLC25A12O75746 678 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 IPO7O95373 1038 aaKnown RBP5.83□□□□□ -1.48
YBX3-210ENST00000540975 UGT1A1P22309 533 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 MARK3P27448 753 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 FMO5P49326 533 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 ZNF234Q14588 700 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 CCDC70Q6NSX1 233 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 TTI2Q6NXR4 508 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 METTL27Q8N6F8 245 aaPredicted RBP5.83□□□□□ -1.48
YBX3-210ENST00000540975 DMBX1Q8NFW5 382 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 TDRD7Q8NHU6 1098 aaKnown RBP5.83□□□□□ -1.48
YBX3-210ENST00000540975 C7orf26Q96N11 449 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 LRRC1Q9BTT6 524 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 PDZD7Q9H5P4 517 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 FKRPQ9H9S5 495 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 MDFICQ9P1T7 246 aa5.83□□□□□ -1.48
YBX3-210ENST00000540975 LIMA1Q9UHB6 759 aaKnown RBP5.83□□□□□ -1.48
YBX3-210ENST00000540975 FAM172BPA6NC97 362 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 B4E171 279 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 FAM90A26D6RGX4 464 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 CAPN9O14815 690 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 FGF17O60258 216 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 WDR1O75083 606 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 PLGP00747 810 aaPredicted RBP5.82□□□□□ -1.48
YBX3-210ENST00000540975 UBA7P41226 1012 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 TSPAN7P41732 249 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 CLDN20P56880 219 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 PITX1P78337 314 aaPredicted RBP5.82□□□□□ -1.48
YBX3-210ENST00000540975 MAD2L1Q13257 205 aaPredicted RBP5.82□□□□□ -1.48
YBX3-210ENST00000540975 MYLK3Q32MK0 819 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 TMEM35AQ53FP2 167 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 STXBP5Q5T5C0 1151 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 TMTC3Q6ZXV5 915 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 GPR180Q86V85 440 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 MAP7D3Q8IWC1 876 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 FRMD1Q8N878 549 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 SGCDQ92629 289 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 UHRF2Q96PU4 802 aa5.82□□□□□ -1.48
YBX3-210ENST00000540975 ARHGEF40Q8TER5 1519 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 HS3ST1O14792 307 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 ZNHIT1O43257 154 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 EIF2S1P05198 315 aaKnown RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 PSMA4P25789 261 aaKnown RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 PRCPP42785 496 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 PHEXP78562 749 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 NIPAL4Q0D2K0 466 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 CDC16Q13042 620 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 ADIPOQQ15848 244 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 SOWAHCQ53LP3 525 aaPredicted RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 LCN10Q6JVE6 187 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 KCTD8Q6ZWB6 473 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 MARK2Q7KZI7 788 aaKnown RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 TRMT1LQ7Z2T5 733 aaKnown RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 NFE4Q86UQ8 179 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 ARHGAP12Q8IWW6 846 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 LRRC8CQ8TDW0 803 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 PGLYRP2Q96PD5 576 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 SEPT5Q99719 369 aaPredicted RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 POLR3CQ9BUI4 534 aaPredicted RBP5.81□□□□□ -1.48
YBX3-210ENST00000540975 COPG2Q9UBF2 871 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 DLGAP4Q9Y2H0 992 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 PIAS3Q9Y6X2 628 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 PRAG1Q86YV5 1406 aa5.81□□□□□ -1.48
YBX3-210ENST00000540975 WDR81Q562E7 1941 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 CTAGE9A4FU28 777 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 ANKRD28O15084 1053 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 TBX18O95935 607 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 CTAGE8P0CG41 777 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 FAM106CPP0CH98 169 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 POLR2CP19387 275 aaPredicted RBP5.8□□□□□ -1.48
YBX3-210ENST00000540975 CD53P19397 219 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 ANOS1P23352 680 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 TERF1P54274 439 aa5.8□□□□□ -1.48
YBX3-210ENST00000540975 ZBED6P86452 979 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms