RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 A0A0G2JNG1 304 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 A0A0J9YYE9 177 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 OR5K4A6NMS3 321 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 KIR2DS3K7RE56 304 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 DNAJC6O75061 913 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 TRBC1P01850 177 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 CTPS1P17812 591 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 SERPINB6P35237 376 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 KIR2DS5Q14953 304 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 PTPRRQ15256 657 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 TCTN3Q6NUS6 607 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 POLNQ7Z5Q5 900 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 PLXDC1Q8IUK5 500 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 TEX26Q8N6G2 289 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 SIDT1Q9NXL6 827 aaKnown RBP26.56■■□□□ 1.84
CHFR-218ENST00000540963 TBC1D29Q9UFV1 150 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 ZNHIT2Q9UHR6 403 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 RPS6KL1Q9Y6S9 549 aa26.56■■□□□ 1.84
CHFR-218ENST00000540963 MN1Q10571 1320 aaPredicted RBP26.56■■□□□ 1.84
CHFR-218ENST00000540963 SPTAN1Q13813 2472 aaKnown RBP26.56■■□□□ 1.84
CHFR-218ENST00000540963 SPTBN1Q01082 2364 aaKnown RBP26.55■■□□□ 1.84
CHFR-218ENST00000540963 A6NCN8 305 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 MKRN2OSH3BPM6 223 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 ASMTLO95671 621 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 PDHA1P08559 390 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 STC1P52823 247 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 NFATC2Q13469 925 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 BOLA3Q53S33 107 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 C16orf46Q6P387 395 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 APTXQ7Z2E3 356 aaKnown RBP26.55■■□□□ 1.84
CHFR-218ENST00000540963 CNOT8Q9UFF9 292 aaKnown RBP26.55■■□□□ 1.84
CHFR-218ENST00000540963 TP53TG5Q9Y2B4 290 aa26.55■■□□□ 1.84
CHFR-218ENST00000540963 LILRA5A6NI73 299 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 ATMINO43313 823 aaPredicted RBP26.54■■□□□ 1.84
CHFR-218ENST00000540963 GZMAP12544 262 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 F3P13726 295 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 AMPD1P23109 780 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 CES1P23141 567 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 CHST15Q7LFX5 561 aaPredicted RBP26.54■■□□□ 1.84
CHFR-218ENST00000540963 LYSMD3Q7Z3D4 306 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 CSPG4P5Q96PW8 444 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 AGAP2Q99490 1192 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 RIOK2Q9BVS4 552 aaKnown RBP26.54■■□□□ 1.84
CHFR-218ENST00000540963 UCK1Q9HA47 277 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 ETNK2Q9NVF9 386 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 SCINQ9Y6U3 715 aa26.54■■□□□ 1.84
CHFR-218ENST00000540963 TMCO5BA8MYB1 307 aa26.53■■□□□ 1.84
CHFR-218ENST00000540963 TOX3O15405 576 aaPredicted RBP26.53■■□□□ 1.84
CHFR-218ENST00000540963 RECKO95980 971 aa26.53■■□□□ 1.84
CHFR-218ENST00000540963 TEX19Q8NA77 164 aa26.53■■□□□ 1.84
CHFR-218ENST00000540963 TRIM7Q9C029 511 aa26.53■■□□□ 1.84
CHFR-218ENST00000540963 POLR1EQ9GZS1 481 aaKnown RBP26.53■■□□□ 1.84
CHFR-218ENST00000540963 LRRC4CQ9HCJ2 640 aa26.53■■□□□ 1.84
CHFR-218ENST00000540963 ZNF106Q9H2Y7 1883 aaKnown RBP26.53■■□□□ 1.84
CHFR-218ENST00000540963 BLACEA4D250 179 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 INPP4BO15327 924 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 C9P02748 559 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 EPHB1P54762 984 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 C4orf17Q53FE4 359 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 ALG1LQ6GMV1 187 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 CCDC13Q8IYE1 715 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 LYSMD1Q96S90 227 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 ULBP3Q9BZM4 244 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 MRPL47Q9HD33 250 aaKnown RBP26.52■■□□□ 1.84
CHFR-218ENST00000540963 CPNE7Q9UBL6 633 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 CNOT6Q9ULM6 557 aaKnown RBP26.52■■□□□ 1.84
CHFR-218ENST00000540963 POLHQ9Y253 713 aa26.52■■□□□ 1.84
CHFR-218ENST00000540963 A0A0U1RQS6 177 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 MTSS1O43312 755 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 CLCNKAP51800 687 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 RPL26P61254 145 aaKnown RBP26.51■■□□□ 1.83
CHFR-218ENST00000540963 IL11RAQ14626 422 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 ATP1A1-AS1Q5TC04 95 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 C6orf15Q6UXA7 325 aaPredicted RBP26.51■■□□□ 1.83
CHFR-218ENST00000540963 NT5MQ9NPB1 228 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 HAUS2Q9NVX0 235 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 AMACRQ9UHK6 382 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 KCND3Q9UK17 655 aa26.51■■□□□ 1.83
CHFR-218ENST00000540963 RPL26L1Q9UNX3 145 aaKnown RBP26.51■■□□□ 1.83
CHFR-218ENST00000540963 PCYT1BQ9Y5K3 369 aaPredicted RBP26.51■■□□□ 1.83
CHFR-218ENST00000540963 ICE1Q9Y2F5 2266 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 SPENQ96T58 3664 aaKnown RBP26.5■■□□□ 1.83
CHFR-218ENST00000540963 NBPF19A0A087WUL8 3843 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 FTLP02792 175 aaPredicted RBP26.5■■□□□ 1.83
CHFR-218ENST00000540963 ATP1A1P05023 1023 aaKnown RBP26.5■■□□□ 1.83
CHFR-218ENST00000540963 CA4P22748 312 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 F8A1P23610 371 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 IL1R2P27930 398 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 DLSTP36957 453 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 MAPK9P45984 424 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 TRIM11Q96F44 468 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 C9orf72Q96LT7 481 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 CARD9Q9H257 536 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 PRDM8Q9NQV8 689 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.5■■□□□ 1.83
CHFR-218ENST00000540963 KLHL3Q9UH77 587 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 KCNK6Q9Y257 313 aa26.5■■□□□ 1.83
CHFR-218ENST00000540963 MRPS18BQ9Y676 258 aaKnown RBP26.5■■□□□ 1.83
CHFR-218ENST00000540963 OAS3Q9Y6K5 1087 aaKnown RBP26.5■■□□□ 1.83
CHFR-218ENST00000540963 UTP20O75691 2785 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms