RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 PYCR3Q53H96 274 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 FOXR1Q6PIV2 292 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 TMC3Q7Z5M5 1100 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 NRROSQ86YC3 692 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 CCNJLQ8IV13 435 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 SYCE1Q8N0S2 351 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 Q8N9G6 341 aaPredicted RBP17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 PTCD2Q8WV60 388 aaKnown RBP17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 NAF1Q96HR8 494 aaKnown RBP17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZNF578Q96N58 590 aaPredicted RBP17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 SPATA16Q9BXB7 569 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 OSBPL8Q9BZF1 889 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZNHIT2Q9UHR6 403 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 SATB2Q9UPW6 733 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 RNF215Q9Y6U7 377 aa17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 COL27A1Q8IZC6 1860 aaPredicted RBP17.03■□□□□ 0.32
CACNA2D4-211ENST00000540728 UNC13CQ8NB66 2214 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 RHPN2P1A8MT19 583 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 EPOP01588 193 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 CD68P34810 354 aaPredicted RBP17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 PTPN7P35236 360 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 WNT3AP56704 352 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 DCDC1P59894 354 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 NOMO1Q15155 1222 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZNF569Q5MCW4 686 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 PEX26Q7Z412 305 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZNF567Q8N184 647 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 UBL4BQ8N7F7 174 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 WDR36Q8NI36 951 aaKnown RBP17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 TMEM74Q96NL1 305 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 WDR24Q96S15 920 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 ZSCAN5AQ9BUG6 496 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 RMI1Q9H9A7 625 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 THSD1Q9NS62 852 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 RSPH14Q9UHP6 348 aa17.02■□□□□ 0.32
CACNA2D4-211ENST00000540728 CCDC187A0A096LP49 1063 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 GRID2IPA4D2P6 1211 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 FADS2P1A8MWK0 482 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 D6RAR5 112 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 CASC3O15234 703 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 DXOO77932 396 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 STK10O94804 968 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 TJP3O95049 919 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 SLC25A14O95258 325 aaPredicted RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 ATP1A1P05023 1023 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 INHBCP55103 352 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 ERVPABLB-1P60509 514 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 OTUD4Q01804 1114 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 MPP3Q13368 585 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 ALS2CLQ60I27 953 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 PDPK2PQ6A1A2 396 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 SPRED1Q7Z699 444 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 TMEM139Q8IV31 216 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 CDKL3Q8IVW4 592 aaPredicted RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 SFTPA2Q8IWL1 248 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 ARL14Q8N4G2 192 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 ACTL9Q8TC94 416 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 TRABDQ9H4I3 376 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 HACD3Q9P035 362 aa17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 NFKBIL1Q9UBC1 381 aaPredicted RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
CACNA2D4-211ENST00000540728 LOC285095A0A1B0GVY8 99 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 A0A1W2PQM1 296 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 GOLGA6L9A6NEM1 432 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 MIF4GDA9UHW6 222 aaKnown RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 ECEL1O95672 775 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 RBL1P28749 1068 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 MAZP56270 477 aaKnown RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 EIF3EP60228 445 aaKnown RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 EIF3IQ13347 325 aaKnown RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 IGF2-ASQ6U949 168 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 KDELC1Q6UW63 502 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 CHST15Q7LFX5 561 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 C17orf82Q86X59 251 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 SLC25A41Q8N5S1 370 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 GPR26Q8NDV2 337 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 ZNF248Q8NDW4 579 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 IPMKQ8NFU5 416 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 EID2BQ96D98 161 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 LIN37Q96GY3 246 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 FCRL3Q96P31 734 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 DESI2Q9BSY9 194 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 FSD1LQ9BXM9 530 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 CARD9Q9H257 536 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 EPB41L5Q9HCM4 733 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 PLEKHM1Q9Y4G2 1056 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 PCDHGA8Q9Y5G5 932 aa17■□□□□ 0.31
CACNA2D4-211ENST00000540728 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
CACNA2D4-211ENST00000540728 LOC400499M0QZD8 3231 aa16.99■□□□□ 0.31
CACNA2D4-211ENST00000540728 F5H423 210 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms