RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
TRAPPC1-202ENST00000540486 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
TRAPPC1-202ENST00000540486 GPR34Q9UPC5 381 aa8.87□□□□□ -0.99
TRAPPC1-202ENST00000540486 DNHD1Q96M86 4753 aa8.87□□□□□ -0.99
TRAPPC1-202ENST00000540486 CCDC168Q8NDH2 2452 aa8.87□□□□□ -0.99
TRAPPC1-202ENST00000540486 ARHGAP10A1A4S6 786 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 BTNL10A8MVZ5 291 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 H3BRJ5 948 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 KPNA3O00505 521 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 TOR1BO14657 336 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 RAD51BO15315 384 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 BNIP3LO60238 219 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 PEX11BO96011 259 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 CHRNA3P32297 505 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 GJC1P36383 396 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 ARL4AP40617 200 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 ABL2P42684 1182 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 GSDMDP57764 484 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 YPEL5P62699 121 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 PPARDQ03181 441 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 ABHD18Q0P651 414 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 SLC10A2Q12908 348 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 MRPL49Q13405 166 aaKnown RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 KRT81Q14533 505 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 PDK2Q15119 407 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 INPP5JQ15735 1006 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 INO80DQ53TQ3 878 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 ANKRD20A8PQ5CZ79 823 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 CARD16Q5EG05 197 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 LRRC38Q5VT99 294 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 SP5Q6BEB4 398 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 C22orf39Q6P5X5 142 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 SPNS3Q6ZMD2 512 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 SPRED1Q7Z699 444 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 GKN2Q86XP6 184 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 NLGN4XQ8N0W4 816 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 LZTR1Q8N653 840 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 Q8N9G6 341 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 GPR156Q8NFN8 814 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 NLGN4YQ8NFZ3 816 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 HPS1Q92902 700 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 ISG20Q96AZ6 181 aaKnown RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 FAF2Q96CS3 445 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 CCDC114Q96M63 670 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 KLF6Q99612 283 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 CEP44Q9C0F1 390 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 TRIT1Q9H3H1 467 aaKnown RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 SEMA6CQ9H3T2 930 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 RCOR3Q9P2K3 495 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 PILRAQ9UKJ1 303 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 HPCAL4Q9UM19 191 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 B3GALT1Q9Y5Z6 326 aa8.86□□□□□ -0.99
TRAPPC1-202ENST00000540486 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ZSCAN5CA6NGD5 496 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ARHGAP42A6NI28 874 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ESPNB1AK53 854 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 LCE2BO14633 110 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 MAFKO60675 156 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PRAMEF11O60813 436 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 RFPL1O75677 317 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 SORBS2O94875 1100 aaKnown RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TMCC1O94876 653 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 CPNE6O95741 557 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PRNPP04156 253 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TNNT1P13805 278 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 CTSEP14091 401 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 GKP32189 559 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 RAB15P59190 212 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 CCZ1BP86790 482 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 CCZ1P86791 482 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TRA2AQ13595 282 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ARHGEF7Q14155 803 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PAFAH1B3Q15102 231 aaKnown RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 MYLK3Q32MK0 819 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 CERCAMQ5T4B2 595 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 DCAF12Q5T6F0 453 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 NCBP2-AS2Q69YL0 99 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 C16orf46Q6P387 395 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TMCO3Q6UWJ1 677 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ZNF354CQ86Y25 554 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 RHOT1Q8IXI2 618 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 STARD8Q92502 1023 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PPP1R16AQ96I34 528 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 NSMCE3Q96MG7 304 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 RNF157Q96PX1 679 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TEFMQ96QE5 360 aaKnown RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 ZNF670Q9BS34 389 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TM6SF2Q9BZW4 377 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 LHX3Q9UBR4 397 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 TLK1Q9UKI8 766 aa8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PNMA8BQ9ULN7 279 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 PRRC2CQ9Y520 2896 aaKnown RBP8.85□□□□□ -0.99
TRAPPC1-202ENST00000540486 LOC101059948A0A1B0GTJ6 334 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 GRID2IPA4D2P6 1211 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 DFFAO00273 331 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 INSIG1O15503 277 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 ZW10O43264 779 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 AP1G1O43747 822 aa8.84□□□□□ -0.99
TRAPPC1-202ENST00000540486 NUDT21O43809 227 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms