RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 HEPHL1Q6MZM0 1159 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 TAPT1Q6NXT6 567 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 TMEM81Q6P7N7 255 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.1□□□□□ -1.43
MRE11-209ENST00000540013 PIK3AP1Q6ZUJ8 805 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 MIER3Q7Z3K6 550 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 DZIP1Q86YF9 867 aaKnown RBP6.1□□□□□ -1.43
MRE11-209ENST00000540013 ZNF280BQ86YH2 543 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 LCORLQ8N3X6 602 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 FBXW8Q8N3Y1 598 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 SUN3Q8TAQ9 357 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 PRR11Q96HE9 360 aaPredicted RBP6.1□□□□□ -1.43
MRE11-209ENST00000540013 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 CRAMP1Q96RY5 1269 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 ADAM2Q99965 735 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 CLSTN3Q9BQT9 956 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.1□□□□□ -1.43
MRE11-209ENST00000540013 NUP85Q9BW27 656 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 KCNK9Q9NPC2 374 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 CD93Q9NPY3 652 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 COX16Q9P0S2 106 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 HSFX1Q9UBD0 423 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 INTS6Q9UL03 887 aaKnown RBP6.1□□□□□ -1.43
MRE11-209ENST00000540013 MAP3K2Q9Y2U5 619 aa6.1□□□□□ -1.43
MRE11-209ENST00000540013 CAB39Q9Y376 341 aaPredicted RBP6.1□□□□□ -1.43
MRE11-209ENST00000540013 ABCC4O15439 1325 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 PIPSLA2A3N6 862 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 HTR3EA5X5Y0 456 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 A6NL46 340 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 O00370 1275 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 IFIT3O14879 490 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 DCLK1O15075 740 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 CTIFO43310 598 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 CA12O43570 354 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TADA2AO75478 443 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 DDNO94850 711 aaPredicted RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 LETM1O95202 739 aaPredicted RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 SPDEFO95238 335 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 PENKP01210 267 aaPredicted RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 LMNAP02545 664 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 ATXN1LP0C7T5 689 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 GHRP10912 638 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TMEM11P17152 192 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TRIM21P19474 475 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 THBS4P35443 961 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 PRKCIP41743 596 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 KIAA1024LP59773 190 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 ACTR1AP61163 376 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 CCNA1P78396 465 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
MRE11-209ENST00000540013 HLXQ14774 488 aaPredicted RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 GSTA3Q16772 222 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 AAK1Q2M2I8 961 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 LETM2Q2VYF4 491 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 RUNDC3AQ59EK9 446 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 KRT79Q5XKE5 535 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SLC25A24Q6NUK1 477 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 ZCCHC12Q6PEW1 402 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SLC46A3Q7Z3Q1 461 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 FAM160B2Q86V87 743 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 Q8N1X5 172 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SFRP1Q8N474 314 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 PLD5Q8N7P1 536 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TC2NQ8N9U0 490 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 CAMKVQ8NCB2 501 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 DNAJB14Q8TBM8 379 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 BCAS4Q8TDM0 211 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 TUBGCP3Q96CW5 907 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 CLMNQ96JQ2 1002 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 COQ10AQ96MF6 247 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SLC46A1Q96NT5 459 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 NEK1Q96PY6 1258 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 HIST1H2AAQ96QV6 131 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 GAL3ST4Q96RP7 486 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 PAFAH2Q99487 392 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 ACPTQ9BZG2 426 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 ISCUQ9H1K1 167 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 EPHX3Q9H6B9 360 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 DDX4Q9NQI0 724 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 PSD3Q9NYI0 1048 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 OGFRQ9NZT2 677 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 TESQ9UGI8 421 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
MRE11-209ENST00000540013 MKLN1Q9UL63 735 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 LIPGQ9Y5X9 500 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 CLCA3PQ9Y6N3 262 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 SQORQ9Y6N5 450 aa6.09□□□□□ -1.43
MRE11-209ENST00000540013 LRRC37AA6NMS7 1700 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 IL16Q14005 1332 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 ZNF541Q9H0D2 1346 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 POLR2AP24928 1970 aaKnown RBP6.08□□□□□ -1.44
MRE11-209ENST00000540013 A0A1W2PRG0 241 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 OOEPA6NGQ2 149 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 UNC119BA6NIH7 251 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 PER2O15055 1255 aa6.08□□□□□ -1.44
MRE11-209ENST00000540013 IPO7O95373 1038 aaKnown RBP6.08□□□□□ -1.44
MRE11-209ENST00000540013 ZFYP08048 801 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms