RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ARSAP15289 507 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 OGNP20774 298 aaKnown RBP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 SH3BP2P78314 561 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 TIAL1Q01085 375 aaKnown RBP eCLIP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 EFEMP1Q12805 493 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 SKIV2LQ15477 1246 aaKnown RBP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 NADK2Q4G0N4 442 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 C6orf10Q5SRN2 563 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 SPOUT1Q5T280 376 aaKnown RBP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 ZNF549Q6P9A3 640 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 BORAQ6PGQ7 559 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 IYDQ6PHW0 289 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 PIM3Q86V86 326 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 DHFR2Q86XF0 187 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 CHERPQ8IWX8 916 aaKnown RBP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 ALDH16A1Q8IZ83 802 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 PNPLA1Q8N8W4 532 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 LRTOMTQ8WZ04 291 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 IGSF8Q969P0 613 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 SAMD11Q96NU1 681 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 CASD1Q96PB1 797 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 CYP2S1Q96SQ9 504 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 TFB2MQ9H5Q4 396 aaKnown RBP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 AKTIPQ9H8T0 292 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 ARMC1Q9NVT9 282 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.49□□□□□ -0.09
CDCA3-207ENST00000538862 GMIPQ9P107 970 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 APPL1Q9UKG1 709 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 DNAJC15Q9Y5T4 150 aa14.49□□□□□ -0.09
CDCA3-207ENST00000538862 PLXNA4Q9HCM2 1894 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 C7orf72A4D263 438 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 CCL22O00626 93 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 GRM6O15303 877 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 RPP40O75818 363 aaKnown RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 CDK14O94921 469 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 GOT2P00505 430 aaKnown RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 ETS2P15036 469 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 ZNF37AP17032 561 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 POU3F3P20264 500 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 MAPKAPK2P49137 400 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 NR1H2P55055 460 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 RALGDSQ12967 914 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 GK3PQ14409 553 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 MAP7D1Q3KQU3 841 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 SDHAF4Q5VUM1 108 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 RBM44Q6ZP01 1051 aaKnown RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 METTL25Q8N6Q8 603 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 PTGR2Q8N8N7 351 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 OR52K2Q8NGK3 314 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 OR9I1Q8NGQ6 314 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 C3orf30Q96M34 536 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 PRPF18Q99633 342 aaKnown RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 SEMA3CQ99985 751 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 GPATCH1Q9BRR8 931 aaKnown RBP14.48□□□□□ -0.09
CDCA3-207ENST00000538862 IRAK4Q9NWZ3 460 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 PCDHB5Q9Y5E4 795 aa14.48□□□□□ -0.09
CDCA3-207ENST00000538862 A0A0J9YYE9 177 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ATP6AP2A0A1C7CYW4 349 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 TTC24A2A3L6 582 aaPredicted RBP14.47□□□□□ -0.09
CDCA3-207ENST00000538862 AZIN1O14977 448 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 PRAMEF11O60813 436 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ATP6AP2O75787 350 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 EOMESO95936 686 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 MTHFD2P13995 350 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 TSPAN8P19075 237 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 GPR15P49685 360 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 SLC7A2P52569 658 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 DSC1Q08554 894 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 SPATS1Q496A3 300 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 KANK2Q63ZY3 851 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 RAP1GAP2Q684P5 730 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 GLB1LQ6UWU2 654 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 LAYNQ6UX15 382 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 B3GNT6Q6ZMB0 384 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ABI1Q8IZP0 508 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 GOLM1Q8NBJ4 401 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 DTNBP1Q96EV8 351 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ZNF599Q96NL3 588 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 RBM38Q9H0Z9 239 aaKnown RBP14.47□□□□□ -0.09
CDCA3-207ENST00000538862 SEMA6AQ9H2E6 1030 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ABCD2Q9UBJ2 740 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 DMTF1Q9Y222 760 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 BPTFQ12830 3046 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 CCDC162PA2VCL2 907 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 VPS4BO75351 444 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 MATN4O95460 622 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 IGLV3-27P01718 113 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 SLC4A1P02730 911 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 BMP2P12643 396 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 ETFBP38117 255 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 CDH13P55290 713 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 NAA20P61599 178 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 RING1Q06587 406 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 NRF1Q16656 503 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 TYSND1Q2T9J0 566 aa14.47□□□□□ -0.09
CDCA3-207ENST00000538862 KIF19Q2TAC6 998 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms