RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PRELID2Q8N945 189 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 BRSK1Q8TDC3 778 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 C1orf54Q8WWF1 131 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 GPR63Q9BZJ6 419 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 RMI1Q9H9A7 625 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 KCND1Q9NSA2 647 aa13.6□□□□□ -0.23
CD9-208ENST00000538834 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD9-208ENST00000538834 USP27XA6NNY8 438 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 GPR89AB7ZAQ6 455 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 CES2O00748 559 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 ZSCAN12O43309 604 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 LDB2O43679 373 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 NUAK1O60285 661 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 FGGP02679 453 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 GPR89BP0CG08 455 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 MYF5P13349 255 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
CD9-208ENST00000538834 CLCNKAP51800 687 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 XIAPP98170 497 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 E2F1Q01094 437 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
CD9-208ENST00000538834 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 PRPSAP1Q14558 356 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 NR1D2Q14995 579 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 CYP1B1Q16678 543 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
CD9-208ENST00000538834 ZDHHC20Q5W0Z9 365 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 GUSBP11Q6P575 273 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 RD3Q7Z3Z2 195 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 ADGRG6Q86SQ4 1221 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 SLC25A41Q8N5S1 370 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 MAIP1Q8WWC4 291 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 TBL1YQ9BQ87 522 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 TRIM39Q9HCM9 518 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
CD9-208ENST00000538834 SMOXQ9NWM0 555 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 ATXN10Q9UBB4 475 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 TMEM98Q9Y2Y6 226 aa13.59□□□□□ -0.23
CD9-208ENST00000538834 ANKRD11Q6UB99 2663 aaPredicted RBP13.58□□□□□ -0.23
CD9-208ENST00000538834 A6NCN8 305 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 ERI2A8K979 691 aaKnown RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 H7C0S8 307 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 PSMD3O43242 534 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 OPA1O60313 960 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 ATP1A1P05023 1023 aaKnown RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 CTSEP14091 401 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PNLIPP16233 465 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 KCNA4P22459 653 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 CXCR5P32302 372 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 ZNF140P52738 457 aaPredicted RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 CTBSQ01459 385 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 HLTFQ14527 1009 aaKnown RBP eCLIP13.58□□□□□ -0.24
CD9-208ENST00000538834 GSE1Q14687 1217 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PERM1Q5SV97 790 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 ZNF438Q7Z4V0 828 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 C11orf96Q7Z7L8 435 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 SFTPA2Q8IWL1 248 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 SLC35F6Q8N357 371 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 ARL10Q8N8L6 244 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 DCBLD1Q8N8Z6 715 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PBKQ96KB5 322 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 FSD1LQ9BXM9 530 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 LRRC40Q9H9A6 602 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 CARS2Q9HA77 564 aaKnown RBP13.58□□□□□ -0.24
CD9-208ENST00000538834 ETNK1Q9HBU6 452 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PADI4Q9UM07 663 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 NEU2Q9Y3R4 380 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 PLEKHM1Q9Y4G2 1056 aa13.58□□□□□ -0.24
CD9-208ENST00000538834 URB1O60287 2271 aaKnown RBP13.57□□□□□ -0.24
CD9-208ENST00000538834 MROH6A6NGR9 719 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 INPP4BO15327 924 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 USP12O75317 370 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 ETS1P14921 441 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 AK4P27144 223 aaPredicted RBP13.57□□□□□ -0.24
CD9-208ENST00000538834 RPL22P35268 128 aaKnown RBP13.57□□□□□ -0.24
CD9-208ENST00000538834 FDFT1P37268 417 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 PEX6Q13608 980 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 LRP8Q14114 963 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 SPARCL1Q14515 664 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 PTPRCAPQ14761 206 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 NR0B2Q15466 257 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 ARHGEF18Q6ZSZ5 1173 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 ZNF547Q8IVP9 402 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 NAGSQ8N159 534 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 KDF1Q8NAX2 398 aaPredicted RBP13.57□□□□□ -0.24
CD9-208ENST00000538834 KYQ8NBH2 561 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 ACTRT1Q8TDG2 376 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 BLOC1S5Q8TDH9 187 aa13.57□□□□□ -0.24
CD9-208ENST00000538834 OR2M4Q96R27 311 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms