RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MGEA5O60502 916 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 NDUFS2O75306 463 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TULP3O75386 442 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 SOX11P35716 441 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 GP2P55259 537 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF280AP59817 542 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 EPS8Q12929 822 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 DGUOKQ16854 277 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 STK32CQ86UX6 486 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 SLC22A16Q86VW1 577 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 IPMKQ8NFU5 416 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 ANKRD49Q8WVL7 239 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 PPP1R16BQ96T49 567 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 ALG9Q9H6U8 611 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 CPNE5Q9HCH3 593 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 NAALAD2Q9Y3Q0 740 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 I6L893 689 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 AZIN1O14977 448 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 INMTO95050 263 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 HGFP14210 728 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TCEA1P23193 301 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 LMO2P25791 158 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 SERPINB1P30740 379 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 SLC26A2P50443 739 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 CDH13P55290 713 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TPD52P55327 224 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 CDC20Q12834 499 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TOP3AQ13472 1001 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 RCAN2Q14206 197 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 GEN1Q17RS7 908 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 FUT11Q495W5 492 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 UGT3A1Q6NUS8 523 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 KIAA2013Q8IYS2 634 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 OR6Q1Q8NGQ2 317 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TUBGCP3Q96CW5 907 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 GDAP2Q9NXN4 497 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 HOXC10Q9NYD6 342 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 KLQ9UEF7 1012 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 PCDHB3Q9Y5E6 796 aa18.51■□□□□ 0.55
SFSWAP-207ENST00000538548 TBC1D4O60343 1298 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 ANXA9O76027 345 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 CDK14O94921 469 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 C22orf31O95567 290 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 MT-CYBP00156 380 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PCMT1P22061 227 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 KCNK10P57789 538 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 MEP1AQ16819 746 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF789Q5FWF6 425 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PAGE2BQ5JRK9 111 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 ARL10Q8N8L6 244 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 NSMCE2Q96MF7 247 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 ZMAT2Q96NC0 199 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 NDEL1Q9GZM8 345 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PARVBQ9HBI1 364 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 WDR6Q9NNW5 1121 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 NECTIN3Q9NQS3 549 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 FAM118AQ9NWS6 357 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 TSC2P49815 1807 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 H3BMM5 538 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PEX10O60683 326 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 EEDO75530 441 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 CAPN15O75808 1086 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 ARIH2O95376 493 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 NADKO95544 446 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 KCNC1P48547 511 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 IGBP1P78318 339 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PIGFQ07326 219 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 KANK2Q63ZY3 851 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 VPS33AQ96AX1 596 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 TXNDC15Q96J42 360 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 TSGA13Q96PP4 275 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 NODALQ96S42 347 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 FICDQ9BVA6 458 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 MID1IP1Q9NPA3 183 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 PCDH12Q9NPG4 1184 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 DERAQ9Y315 318 aa18.5■□□□□ 0.55
SFSWAP-207ENST00000538548 DOCK1Q14185 1865 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ASPDHA6ND91 283 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF99A8MXY4 864 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 NEK2P51955 445 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 HIST2H2ACQ16777 129 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ATAD3BQ5T9A4 648 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ISCA2Q86U28 154 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ARMC8Q8IUR7 673 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF555Q8NEP9 628 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 TMEM74Q96NL1 305 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 FCRL5Q96RD9 977 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 FEM1AQ9BSK4 669 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 PRKD2Q9BZL6 878 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 CXCL16Q9H2A7 254 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 SP140LQ9H930 580 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 MOV10Q9HCE1 1003 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 POLG2Q9UHN1 485 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 ZNF229Q9UJW7 825 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 MAGED1Q9Y5V3 778 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 GPR45Q9Y5Y3 372 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 PLXNA1Q9UIW2 1896 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 RAP2AP10114 183 aa18.49■□□□□ 0.55
SFSWAP-207ENST00000538548 SLC26A3P40879 764 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms