RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TRPM5Q9NZQ8 1165 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 PCDHGB4Q9UN71 923 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 PCDHGB5Q9Y5G0 923 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 HOXA2O43364 376 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 C1RP00736 705 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 CHN2P52757 468 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 LCP2Q13094 533 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 PLD1Q13393 1074 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 VPS26BQ4G0F5 336 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 CXorf57Q6NSI4 855 aaKnown RBP24.76■■□□□ 1.55
RAB40C-204ENST00000538492 TICAM1Q8IUC6 712 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 TMEM102Q8N9M5 508 aaPredicted RBP24.76■■□□□ 1.55
RAB40C-204ENST00000538492 TTC16Q8NEE8 873 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 ADCY4Q8NFM4 1077 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 PXYLP1Q8TE99 480 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 ESAMQ96AP7 390 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 TRAPPC9Q96Q05 1148 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 MRPL40Q9NQ50 206 aaKnown RBP24.76■■□□□ 1.55
RAB40C-204ENST00000538492 CD300AQ9UGN4 299 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 POLG2Q9UHN1 485 aa24.76■■□□□ 1.55
RAB40C-204ENST00000538492 C15orf38-AP3S2A0A0A6YYH1 394 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 MYCP01106 439 aaPredicted RBP24.75■■□□□ 1.55
RAB40C-204ENST00000538492 HGFP14210 728 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TRAF2Q12933 501 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TAF12Q16514 161 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 ARPINQ7Z6K5 226 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TMEM126BQ8IUX1 230 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 PHYKPLQ8IUZ5 450 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 LRRC43Q8N309 656 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TMEM181Q9P2C4 612 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 AP4S1Q9Y587 144 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 CRCPO75575 148 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TMCC1O94876 653 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 CSPG5O95196 566 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 CD160O95971 181 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 PRDX3P30048 256 aaKnown RBP24.75■■□□□ 1.55
RAB40C-204ENST00000538492 CCL23P55773 120 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TWF1Q12792 350 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TCF12Q99081 682 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 TBC1D30Q9Y2I9 924 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 AP4B1Q9Y6B7 739 aa24.75■■□□□ 1.55
RAB40C-204ENST00000538492 OAS3Q9Y6K5 1087 aaKnown RBP24.75■■□□□ 1.55
RAB40C-204ENST00000538492 ATP6V0D1P61421 351 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 GRM2Q14416 872 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 C6orf10Q5SRN2 563 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 ANKS6Q68DC2 871 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 KLHDC10Q6PID8 442 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 HHIPL1Q96JK4 782 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 CLSTN3Q9BQT9 956 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 ADGRE3Q9BY15 652 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 SARS2Q9NP81 518 aaKnown RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 UBAP1Q9NZ09 502 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 STX7O15400 261 aaKnown RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 PQBP1O60828 265 aaKnown RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 PKMP14618 531 aaKnown RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 CTSL3PQ5NE16 218 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 SAMD4BQ5PRF9 694 aaKnown RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 C8orf82Q6P1X6 216 aaPredicted RBP24.74■■□□□ 1.55
RAB40C-204ENST00000538492 MIER2Q8N344 545 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 CATSPER1Q8NEC5 780 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 EEF1AKMT1Q8WVE0 214 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 BHMTQ93088 406 aa24.74■■□□□ 1.55
RAB40C-204ENST00000538492 DENRO43583 198 aaKnown RBP24.73■■□□□ 1.55
RAB40C-204ENST00000538492 VPS26AO75436 327 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 PYGLP06737 847 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 C8BP07358 591 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 CAPN3P20807 821 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 MZF1P28698 734 aaPredicted RBP24.73■■□□□ 1.55
RAB40C-204ENST00000538492 GRIA2P42262 883 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 RHDQ02161 417 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 GK3PQ14409 553 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 C6orf52Q5T4I8 152 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 CHST9Q7L1S5 443 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 CARNMT1Q8N4J0 409 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 LRTOMTQ8WZ04 291 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 CNBD2Q96M20 576 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 RETREG1Q9H6L5 497 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 MAP10Q9P2G4 905 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 TSR3Q9UJK0 312 aaKnown RBP24.73■■□□□ 1.55
RAB40C-204ENST00000538492 RPL26P61254 145 aaKnown RBP24.73■■□□□ 1.55
RAB40C-204ENST00000538492 UGT3A1Q6NUS8 523 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 DEFB128Q7Z7B8 93 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 PCYOX1LQ8NBM8 494 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 OVCA2Q8WZ82 227 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 FAM192AQ9GZU8 254 aa24.73■■□□□ 1.55
RAB40C-204ENST00000538492 TRMT6Q9UJA5 497 aaKnown RBP24.73■■□□□ 1.55
RAB40C-204ENST00000538492 SYCE1LA8MT33 242 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 IQCF5A8MTL0 148 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 LBPP18428 481 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 CHRM3P20309 590 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 TTPAP49638 278 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 DIO3P55073 304 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 CDKL1Q00532 357 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 RPS6KA2Q15349 733 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 MAP7D1Q3KQU3 841 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 THEMIS2Q5TEJ8 643 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 TAS2R42Q7RTR8 314 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 MARVELD2Q8N4S9 558 aa24.72■■□□□ 1.55
RAB40C-204ENST00000538492 NKAPQ8N5F7 415 aaKnown RBP24.72■■□□□ 1.55
RAB40C-204ENST00000538492 NAT14Q8WUY8 206 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms