RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RTL3Q8N8U3 475 aaKnown RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 LRRC57Q8N9N7 239 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TERB1Q8NA31 727 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FIBINQ8TAL6 211 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 WFIKKN2Q8TEU8 576 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ATRIPQ8WXE1 791 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RUBCNQ92622 972 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 EDAQ92838 391 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 IGSF8Q969P0 613 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CSPG4P5Q96PW8 444 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 NELL2Q99435 816 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF670Q9BS34 389 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CIPCQ9C0C6 399 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FAM107BQ9H098 131 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 EPC1Q9H2F5 836 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SEMA4AQ9H3S1 761 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 MS4A5Q9H3V2 200 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 POFUT1Q9H488 388 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 VIPAS39Q9H9C1 493 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 Q9UFV3 132 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 VPS28Q9UK41 221 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ADAM29Q9UKF5 820 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ADAM21Q9UKJ8 722 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 PLA2G4CQ9UP65 541 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ATP8A1Q9Y2Q0 1164 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 JRKLQ9Y4A0 524 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SNX10Q9Y5X0 201 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 COL4A3Q01955 1670 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 COL4A2P08572 1712 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ILVBLA1L0T0 632 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TARSL2A2RTX5 802 aaKnown RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TMEM221A6NGB7 291 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ARHGAP42A6NI28 874 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DRGXA6NNA5 263 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF487B1APH4 448 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 M0R296 226 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DFFAO00273 331 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 APOL1O14791 398 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 NEBLO76041 1014 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CNTN5O94779 1100 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TJP3O95049 919 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 EGFP01133 1207 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 INHBBP09529 407 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 RHOXF2BP0C7M4 288 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ZFXP17010 805 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ERCC2P18074 760 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 POLR2EP19388 210 aaKnown RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CD72P21854 359 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 KDELR1P24390 212 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 HOXC13P31276 330 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CD70P32970 193 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CSKP41240 450 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TNFRSF4P43489 277 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 MARCKSL1P49006 195 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 SESN3P58005 492 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 YBEYP58557 167 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 STARD6P59095 220 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ST8SIA6P61647 398 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 VSNL1P62760 191 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DYNLT1P63172 113 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TMPRSS15P98073 1019 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 GNA12Q03113 381 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 LMAN2Q12907 356 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DPYSQ14117 519 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TFDP2Q14188 446 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CASP8Q14790 479 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 MYBPC3Q14896 1274 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 POLD3Q15054 466 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 PLEKHG6Q3KR16 790 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 FUT11Q495W5 492 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TTC31Q49AM3 519 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 C5orf22Q49AR2 442 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 FBLN7Q53RD9 439 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ANKRD20A8PQ5CZ79 823 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 PITRM1Q5JRX3 1037 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DGKKQ5KSL6 1271 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 SEL1L2Q5TEA6 688 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 KAZNQ674X7 775 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 NAIF1Q69YI7 327 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 SERPINA13PQ6UXR4 307 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 SPOCD1Q6ZMY3 1216 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 LHFPL2Q6ZUX7 228 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 KANSL1Q7Z3B3 1105 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 GPR155Q7Z3F1 870 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 TRMT11Q7Z4G4 463 aaKnown RBP4.37□□□□□ -1.71
SNHG1-208ENST00000538266 RFX6Q8HWS3 928 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF683Q8IZ20 524 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 CHPFQ8IZ52 775 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 LGI4Q8N135 537 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 SLC35F6Q8N357 371 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 ATPAF2Q8N5M1 289 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 DCAF4L2Q8NA75 395 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 PJA1Q8NG27 643 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 EXD1Q8NHP7 514 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 NSMCE1Q8WV22 266 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 RAPGEF5Q92565 580 aa4.37□□□□□ -1.71
SNHG1-208ENST00000538266 KRT35Q92764 455 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms