RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MYF5P13349 255 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
CHFR-216ENST00000538235 NMBRP28336 390 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SPAM1P38567 509 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 RXRGP48443 463 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
CHFR-216ENST00000538235 YPEL5P62699 121 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 B4GALNT1Q00973 533 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 DR1Q01658 176 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 CDH17Q12864 832 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 C1orf61Q13536 156 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 IZUMO3Q5VZ72 239 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 NLRP8Q86W28 1048 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 NRROSQ86YC3 692 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 PIANPQ8IYJ0 282 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 TRAM1L1Q8N609 369 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 ZNF548Q8NEK5 533 aaPredicted RBP12.99□□□□□ -0.33
CHFR-216ENST00000538235 WDR92Q96MX6 357 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 PLEKHG4BQ96PX9 1271 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 TRIM31Q9BZY9 425 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 ZDHHC5Q9C0B5 715 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 TRABDQ9H4I3 376 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 FAM96AQ9H5X1 160 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 DNAJC28Q9NX36 388 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 GRHL1Q9NZI5 618 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SLC17A4Q9Y2C5 497 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 PRKAB1Q9Y478 270 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 U3KQA8 63 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SPTBN2O15020 2390 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 PRSS38A1L453 326 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 E7EVH7 732 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 SLC30A4O14863 429 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 SH3BP5O60239 455 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 HOXC4P09017 264 aaPredicted RBP12.98□□□□□ -0.33
CHFR-216ENST00000538235 DGKAP23743 735 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 FOXN2P32314 431 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 CCT8P50990 548 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 THOP1P52888 689 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 ACVR1Q04771 509 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 PPP1R7Q15435 360 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 FNBP1LQ5T0N5 605 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 PSAPL1Q6NUJ1 521 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 LRRC8BQ6P9F7 803 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 ENPP7Q6UWV6 458 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 PPP1R21Q6ZMI0 780 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 ADGRG6Q86SQ4 1221 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 ZNF547Q8IVP9 402 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 IGDCC3Q8IVU1 814 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 RAVER1Q8IY67 606 aaKnown RBP12.98□□□□□ -0.33
CHFR-216ENST00000538235 CCHCR1Q8TD31 782 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 SCARF2Q96GP6 870 aaPredicted RBP12.98□□□□□ -0.33
CHFR-216ENST00000538235 TBATAQ96M53 351 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 SPATA16Q9BXB7 569 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 TMEM168Q9H0V1 697 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 CHRAC1Q9NRG0 131 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 TREX1Q9NSU2 369 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 NLE1Q9NVX2 485 aaPredicted RBP12.98□□□□□ -0.33
CHFR-216ENST00000538235 DLL3Q9NYJ7 618 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 IL1RAPL1Q9NZN1 696 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 MARCH4Q9P2E8 410 aaPredicted RBP12.98□□□□□ -0.33
CHFR-216ENST00000538235 ATXN10Q9UBB4 475 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 RNF14Q9UBS8 474 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 ASIC3Q9UHC3 531 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 SUFUQ9UMX1 484 aa12.98□□□□□ -0.33
CHFR-216ENST00000538235 GLYATL1P3A0A0U1RQE8 302 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 CCDC162PA2VCL2 907 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 AGAP14A8MT82 685 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 STX7O15400 261 aaKnown RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 PSMD3O43242 534 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 PCDHGA12O60330 932 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 SEC31AO94979 1220 aaKnown RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 PRAMEF1O95521 474 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 EML2O95834 649 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 GAS8O95995 478 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 ZNF883P0CG24 379 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 ZNF8P17098 575 aaPredicted RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 JUNDP17535 347 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 NFKBIAP25963 317 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 ACTN2P35609 894 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 PAFAH1B1P43034 410 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 LMAN1P49257 510 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 HK3P52790 923 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 CTSCP53634 463 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 SRP54P61011 504 aaKnown RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 GPRC6AQ5T6X5 926 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 TSTD2Q5T7W7 516 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 HIBCHQ6NVY1 386 aaPredicted RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 ZDHHC24Q6UX98 284 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
CHFR-216ENST00000538235 RD3Q7Z3Z2 195 aa12.97□□□□□ -0.33
CHFR-216ENST00000538235 LINC00523Q86TU6 105 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms