RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 RCAN2Q14206 197 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 GRB7Q14451 532 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 CBX2Q14781 532 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 TGFBIQ15582 683 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 FGD3Q5JSP0 725 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 RBM48Q5RL73 367 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 GRAMD4Q6IC98 578 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 C16orf87Q6PH81 154 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 PRR23BQ6ZRT6 265 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 FKBP9P1Q75LS8 142 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 CTU1Q7Z7A3 348 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 CENPSQ8N2Z9 138 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 SFRP1Q8N474 314 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 RAB2BQ8WUD1 216 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 TANKQ92844 425 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 PEX13Q92968 403 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 TUBGCP3Q96CW5 907 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 IMP4Q96G21 291 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 SLC30A3Q99726 388 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 TFB2MQ9H5Q4 396 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 GPN2Q9H9Y4 310 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 MAGEE1Q9HCI5 957 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 RGS18Q9NS28 235 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 AIG1Q9NVV5 245 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 POLR3BQ9NW08 1133 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 GPR45Q9Y5Y3 372 aa12.1□□□□□ -0.47
CPSF7-218ENST00000537641 OAS3Q9Y6K5 1087 aaKnown RBP12.1□□□□□ -0.47
CPSF7-218ENST00000537641 MROH6A6NGR9 719 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 TMX2-CTNND1H3BSU7 103 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 BCL10O95999 233 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 HPRP00739 348 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 NPPAP01160 153 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 CDH1P12830 882 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 HGFP14210 728 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 KCNC1P48547 511 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-218ENST00000537641 CRY1Q16526 586 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 PCSK7Q16549 785 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 GEN1Q17RS7 908 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-218ENST00000537641 BPIFB1Q8TDL5 484 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 RDH12Q96NR8 316 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 MTG1Q9BT17 334 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-218ENST00000537641 SIK2Q9H0K1 926 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 FAM105AQ9NUU6 356 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 MAGEL2Q9UJ55 1249 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 DSEQ9UL01 958 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 ST3GAL5Q9UNP4 418 aa12.09□□□□□ -0.47
CPSF7-218ENST00000537641 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
CPSF7-218ENST00000537641 ZFC3H1O60293 1989 aaKnown RBP12.09□□□□□ -0.47
CPSF7-218ENST00000537641 CFAP99D6REC4 459 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ABCB7O75027 752 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 TULP3O75386 442 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 PAGE1O75459 146 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 SERPINB7O75635 380 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 SULT1C4O75897 302 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 SNAP29O95721 258 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 CLIC3O95833 236 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.47
CPSF7-218ENST00000537641 THP07101 528 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 TFPTP0C1Z6 253 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 CD247P20963 164 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 CCR1P32246 355 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 CDH13P55290 713 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 GABARAPL2P60520 117 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ACVR1Q04771 509 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 BNIP3Q12983 259 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 LCP2Q13094 533 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 NEDD8Q15843 81 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 EML3Q32P44 896 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ARTNQ5T4W7 220 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 NANOGP8Q6NSW7 305 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 XKR5Q6UX68 686 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 GPR150Q8NGU9 434 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ATOH8Q96SQ7 321 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 NAA50Q9GZZ1 169 aaKnown RBP12.08□□□□□ -0.47
CPSF7-218ENST00000537641 SMOC2Q9H3U7 446 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 TUBB1Q9H4B7 451 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 ERGIC3Q9Y282 383 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 SH3BP1Q9Y3L3 701 aa12.08□□□□□ -0.47
CPSF7-218ENST00000537641 GBF1Q92538 1859 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 KERAO60938 352 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 PRSS23O95084 383 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 RPS17P08708 135 aaKnown RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ENO2P09104 434 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 SLC2A3P11169 496 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF37AP17032 561 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 OGNP20774 298 aaKnown RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 RPL9P32969 192 aaKnown RBP12.08□□□□□ -0.48
CPSF7-218ENST00000537641 ETFBP38117 255 aa12.08□□□□□ -0.48
CPSF7-218ENST00000537641 RENBPP51606 427 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms