RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 HERVK_113P63132 956 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 CARD16Q5EG05 197 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 CERS6Q6ZMG9 384 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 RPS27LQ71UM5 84 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 ADGRD2Q7Z7M1 963 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 PHTF2Q8N3S3 785 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 NKAPQ8N5F7 415 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 PAF1Q8N7H5 531 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 RBM15BQ8NDT2 890 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 EXT2Q93063 718 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 SAMD11Q96NU1 681 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 LBHD1Q9BQE6 289 aaPredicted RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 CCDC28BQ9BUN5 200 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 ERVK-6Q9BXR3 956 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 EML4Q9HC35 981 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 TNFRSF12AQ9NP84 129 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 TRMT6Q9UJA5 497 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 CDYLQ9Y232 598 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 MRPS23Q9Y3D9 190 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 TRBV5-4A0A0C4DH59 114 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 GOLGA8QA0A0J9YX86 632 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 GOLGA8OA6NCC3 632 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 B2RBV5 119 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 GOLGA8NF8WBI6 632 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 NEMP1O14524 444 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 BPIP17213 487 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 NCF2P19878 526 aaPredicted RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 EPHA3P29320 983 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 GPM6BQ13491 265 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 PDCD2Q16342 344 aaPredicted RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 LSM12Q3MHD2 195 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 UNC50Q53HI1 259 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 C9orf50Q5SZB4 431 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 DPY19L3Q6ZPD9 716 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 SNX20Q7Z614 316 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 TSPAN33Q86UF1 283 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 CUZD1Q86UP6 607 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 ADGRG2Q8IZP9 1017 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 PTGR2Q8N8N7 351 aaPredicted RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 SIDT2Q8NBJ9 832 aaKnown RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 ITFG1Q8TB96 612 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 FAR2Q96K12 515 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 MCCC1Q96RQ3 725 aaPredicted RBP22.55■■□□□ 1.2
HMGA2-206ENST00000536545 SUV39H2Q9H5I1 410 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 ZNF385DQ9H6B1 395 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 IL26Q9NPH9 171 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 SLCO3A1Q9UIG8 710 aa22.55■■□□□ 1.2
HMGA2-206ENST00000536545 PRMT5O14744 637 aaPredicted RBP22.54■■□□□ 1.2
HMGA2-206ENST00000536545 RPS3P23396 243 aaKnown RBP eCLIP22.54■■□□□ 1.2
HMGA2-206ENST00000536545 CA5AP35218 305 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 ERVK-21P61565 698 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 NFATC2Q13469 925 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 TMEM215Q68D42 235 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 ACAD11Q709F0 780 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 SERPINA9Q86WD7 417 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 TMPRSS6Q8IU80 811 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 AHI1Q8N157 1196 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 CBARPQ8N350 705 aaPredicted RBP22.54■■□□□ 1.2
HMGA2-206ENST00000536545 MAELQ96JY0 434 aaKnown RBP22.54■■□□□ 1.2
HMGA2-206ENST00000536545 SLC2A11Q9BYW1 496 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 MMADHCQ9H3L0 296 aaPredicted RBP22.54■■□□□ 1.2
HMGA2-206ENST00000536545 ZDHHC6Q9H6R6 413 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 APPL1Q9UKG1 709 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 PCDHB1Q9Y5F3 818 aa22.54■■□□□ 1.2
HMGA2-206ENST00000536545 SLC9A3R1O14745 358 aaPredicted RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 DCXO43602 365 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 POP4O95707 220 aaKnown RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 ITGALP20701 1170 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 PRDX6P30041 224 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 CBX2Q14781 532 aaPredicted RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 NAA25Q14CX7 972 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 CRTC1Q6UUV9 634 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 Q6ZVU0 165 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 RBM23Q86U06 439 aaKnown RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 STAG3L4Q8TBR4 150 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 CCDC97Q96F63 343 aaPredicted RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 PPP1R36Q96LQ0 422 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 ZNF641Q96N77 438 aaPredicted RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 LRRC3BQ96PB8 259 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 PLA2G4CQ9UP65 541 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 NPEPPSL1A6NEC2 478 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 TRPC5OSA6NMA1 111 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 WASH3PC4AMC7 463 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 SDHDO14521 159 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 UBFD1O14562 309 aaKnown RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 BNIP3LO60238 219 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 PAPLNO95428 1278 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 SPAM1P38567 509 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 CLCN7P51798 805 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 TSNQ15631 228 aaKnown RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 ACCSLQ4AC99 568 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 TPRG1Q6ZUI0 275 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 USP45Q70EL2 814 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 PLPP6Q8IY26 295 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 CHST14Q8NCH0 376 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 MAGEC3Q8TD91 643 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 SMG7Q92540 1137 aaKnown RBP22.53■■□□□ 1.2
HMGA2-206ENST00000536545 SCRN2Q96FV2 425 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 C1orf21Q9H246 121 aa22.53■■□□□ 1.2
HMGA2-206ENST00000536545 GLYATL1P3A0A0U1RQE8 302 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms