RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZFAND4Q86XD8 727 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 RFX6Q8HWS3 928 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 RHOT1Q8IXI2 618 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 ZNF843Q8N446 348 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 RCBTB1Q8NDN9 531 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 NUDT22Q9BRQ3 303 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 TSPY26PQ9H489 355 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 ZFYVE1Q9HBF4 777 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 KCNK4Q9NYG8 393 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 SEPT10Q9P0V9 454 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 VPS18Q9P253 973 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 OAS3Q9Y6K5 1087 aaKnown RBP8.84□□□□□ -0.99
COPB1-211ENST00000534234 LOC400499M0QZD8 3231 aa8.84□□□□□ -0.99
COPB1-211ENST00000534234 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
COPB1-211ENST00000534234 SMG1Q96Q15 3661 aaKnown RBP8.83□□□□□ -1
COPB1-211ENST00000534234 IGHV5-10-1A0A0J9YXX1 117 aa8.83□□□□□ -1
COPB1-211ENST00000534234 FADS2P1A8MWK0 482 aa8.83□□□□□ -1
COPB1-211ENST00000534234 C9orf172C9J069 976 aa8.83□□□□□ -1
COPB1-211ENST00000534234 HGSO14964 777 aaPredicted RBP8.83□□□□□ -1
COPB1-211ENST00000534234 PPP1R12AO14974 1030 aaPredicted RBP8.83□□□□□ -1
COPB1-211ENST00000534234 DNAJC6O75061 913 aa8.83□□□□□ -1
COPB1-211ENST00000534234 KRT1P04264 644 aa8.83□□□□□ -1
COPB1-211ENST00000534234 LIPCP11150 499 aa8.83□□□□□ -1
COPB1-211ENST00000534234 CCL4P13236 92 aa8.83□□□□□ -1
COPB1-211ENST00000534234 MPSTP25325 297 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SLC1A1P43005 524 aa8.83□□□□□ -1
COPB1-211ENST00000534234 FASLGP48023 281 aa8.83□□□□□ -1
COPB1-211ENST00000534234 PPM1FP49593 454 aaPredicted RBP8.83□□□□□ -1
COPB1-211ENST00000534234 DYNLT1P63172 113 aa8.83□□□□□ -1
COPB1-211ENST00000534234 CDK18Q07002 472 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SQSTM1Q13501 440 aa8.83□□□□□ -1
COPB1-211ENST00000534234 LY6DQ14210 128 aa8.83□□□□□ -1
COPB1-211ENST00000534234 HENMT1Q5T8I9 393 aaKnown RBP8.83□□□□□ -1
COPB1-211ENST00000534234 MFSD7Q6UXD7 560 aa8.83□□□□□ -1
COPB1-211ENST00000534234 B4GALNT4Q76KP1 1039 aa8.83□□□□□ -1
COPB1-211ENST00000534234 LYSMD3Q7Z3D4 306 aa8.83□□□□□ -1
COPB1-211ENST00000534234 ZNF605Q86T29 641 aa8.83□□□□□ -1
COPB1-211ENST00000534234 CNGA4Q8IV77 575 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SFRP1Q8N474 314 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SLC37A2Q8TED4 501 aa8.83□□□□□ -1
COPB1-211ENST00000534234 TTC9Q92623 222 aa8.83□□□□□ -1
COPB1-211ENST00000534234 EID2BQ96D98 161 aa8.83□□□□□ -1
COPB1-211ENST00000534234 IMP4Q96G21 291 aaKnown RBP8.83□□□□□ -1
COPB1-211ENST00000534234 OLFM3Q96PB7 478 aa8.83□□□□□ -1
COPB1-211ENST00000534234 TRIB3Q96RU7 358 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SLC38A3Q99624 504 aa8.83□□□□□ -1
COPB1-211ENST00000534234 ANP32EQ9BTT0 268 aa8.83□□□□□ -1
COPB1-211ENST00000534234 BRD8Q9H0E9 1235 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SLC25A51Q9H1U9 297 aa8.83□□□□□ -1
COPB1-211ENST00000534234 RMI1Q9H9A7 625 aa8.83□□□□□ -1
COPB1-211ENST00000534234 MAGEE1Q9HCI5 957 aa8.83□□□□□ -1
COPB1-211ENST00000534234 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
COPB1-211ENST00000534234 FOXJ2Q9P0K8 574 aa8.83□□□□□ -1
COPB1-211ENST00000534234 INTUQ9ULD6 942 aa8.83□□□□□ -1
COPB1-211ENST00000534234 SHOC2Q9UQ13 582 aa8.83□□□□□ -1
COPB1-211ENST00000534234 HYOU1Q9Y4L1 999 aa8.83□□□□□ -1
COPB1-211ENST00000534234 PCDHB11Q9Y5F2 797 aa8.83□□□□□ -1
COPB1-211ENST00000534234 PCYT1BQ9Y5K3 369 aaPredicted RBP8.83□□□□□ -1
COPB1-211ENST00000534234 BAHCC1Q9P281 2608 aa8.83□□□□□ -1
COPB1-211ENST00000534234 PTPRQQ9UMZ3 2332 aa8.83□□□□□ -1
COPB1-211ENST00000534234 AKR1B15C9JRZ8 316 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 SPOPO43791 374 aa8.82□□□□□ -1
COPB1-211ENST00000534234 SLC25A14O95258 325 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 EML2O95834 649 aa8.82□□□□□ -1
COPB1-211ENST00000534234 PIRTP0C851 137 aa8.82□□□□□ -1
COPB1-211ENST00000534234 FGF3P11487 239 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 COMTP21964 271 aa8.82□□□□□ -1
COPB1-211ENST00000534234 CSTF2P33240 577 aaKnown RBP eCLIP8.82□□□□□ -1
COPB1-211ENST00000534234 GPLD1P80108 840 aa8.82□□□□□ -1
COPB1-211ENST00000534234 TRA2AQ13595 282 aaKnown RBP eCLIP8.82□□□□□ -1
COPB1-211ENST00000534234 TCEAL1Q15170 157 aa8.82□□□□□ -1
COPB1-211ENST00000534234 LLGL1Q15334 1064 aa8.82□□□□□ -1
COPB1-211ENST00000534234 PCSK7Q16549 785 aa8.82□□□□□ -1
COPB1-211ENST00000534234 TEX44Q53QW1 395 aa8.82□□□□□ -1
COPB1-211ENST00000534234 CCDC70Q6NSX1 233 aa8.82□□□□□ -1
COPB1-211ENST00000534234 TMEM71Q6P5X7 295 aa8.82□□□□□ -1
COPB1-211ENST00000534234 IYDQ6PHW0 289 aa8.82□□□□□ -1
COPB1-211ENST00000534234 BZW1Q7L1Q6 419 aaKnown RBP8.82□□□□□ -1
COPB1-211ENST00000534234 TMC3Q7Z5M5 1100 aa8.82□□□□□ -1
COPB1-211ENST00000534234 ZNF761Q86XN6 746 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 AGBL5Q8NDL9 886 aa8.82□□□□□ -1
COPB1-211ENST00000534234 GPR26Q8NDV2 337 aa8.82□□□□□ -1
COPB1-211ENST00000534234 OR4D9Q8NGE8 314 aa8.82□□□□□ -1
COPB1-211ENST00000534234 SPATA22Q8NHS9 363 aa8.82□□□□□ -1
COPB1-211ENST00000534234 AHCYL2Q96HN2 611 aaKnown RBP8.82□□□□□ -1
COPB1-211ENST00000534234 CCDC74BQ96LY2 380 aa8.82□□□□□ -1
COPB1-211ENST00000534234 TAAR9Q96RI9 348 aa8.82□□□□□ -1
COPB1-211ENST00000534234 DPYSL5Q9BPU6 564 aa8.82□□□□□ -1
COPB1-211ENST00000534234 SPATA16Q9BXB7 569 aa8.82□□□□□ -1
COPB1-211ENST00000534234 GPR63Q9BZJ6 419 aa8.82□□□□□ -1
COPB1-211ENST00000534234 B3GNT4Q9C0J1 378 aa8.82□□□□□ -1
COPB1-211ENST00000534234 CARD9Q9H257 536 aa8.82□□□□□ -1
COPB1-211ENST00000534234 ARFGAP3Q9NP61 516 aa8.82□□□□□ -1
COPB1-211ENST00000534234 ATXN10Q9UBB4 475 aa8.82□□□□□ -1
COPB1-211ENST00000534234 SAE1Q9UBE0 346 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 TBC1D29Q9UFV1 150 aa8.82□□□□□ -1
COPB1-211ENST00000534234 KCNK6Q9Y257 313 aa8.82□□□□□ -1
COPB1-211ENST00000534234 COL27A1Q8IZC6 1860 aaPredicted RBP8.82□□□□□ -1
COPB1-211ENST00000534234 RP1P56715 2156 aa8.82□□□□□ -1
COPB1-211ENST00000534234 GRID2O43424 1007 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms