RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 SNX2O60749 519 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ABLIM3O94929 683 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 TNFAIP8O95379 198 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ESRRBO95718 433 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PRLP01236 227 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 CXCL10P02778 98 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 F11P03951 625 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 INHAP05111 366 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PRR35P0CG20 571 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 MC4RP32245 332 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 IL2P60568 153 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 AP1S1P61966 158 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 RPS6KA2Q15349 733 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 TAF12Q16514 161 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 CRY1Q16526 586 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 LIN52Q52LA3 116 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 NCEH1Q6PIU2 408 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 CYHR1Q6ZMK1 362 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PHYKPLQ8IUZ5 450 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 TMEM102Q8N9M5 508 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 HJURPQ8NCD3 748 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 MDGA1Q8NFP4 955 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ZNF461Q8TAF7 563 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 MYEOVQ96EZ4 313 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 B3GALT6Q96L58 329 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PRICKLE1Q96MT3 831 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 GPATCH1Q9BRR8 931 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 KLF16Q9BXK1 252 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 TRIM54Q9BYV2 358 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 COPS7BQ9H9Q2 264 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 MAGEE1Q9HCI5 957 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ARMC1Q9NVT9 282 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 SPO11Q9Y5K1 396 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 C15orf38-AP3S2A0A0A6YYH1 394 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 CAPN8A6NHC0 703 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 H3BMM5 538 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 IFRD1O00458 451 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 PIP5K1BO14986 540 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 DNAJA2O60884 412 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ECI2O75521 394 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 GJB5O95377 273 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ALDOCP09972 364 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 PABPC4LP0CB38 370 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 ZCCHC18P0CG32 403 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 HMGA1P17096 107 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 RPS3P23396 243 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATM-222ENST00000533733 CALRP27797 417 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 FMO4P31512 558 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 OR1D2P34982 312 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 RPS24P62847 133 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 CREB5Q02930 508 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 CACNG1Q06432 222 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 INPP5AQ14642 412 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PTPRNQ16849 979 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 METTL2BQ6P1Q9 378 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PAOXQ6QHF9 649 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PRSS55Q6UWB4 352 aaPredicted RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 ARPINQ7Z6K5 226 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ADAMTSL2Q86TH1 951 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 PCDH20Q8N6Y1 951 aaKnown RBP11.89□□□□□ -0.51
ATM-222ENST00000533733 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 DDI1Q8WTU0 396 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 EXT2Q93063 718 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 TUBGCP3Q96CW5 907 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 GPR21Q99679 349 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 OSBPL11Q9BXB4 747 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
ATM-222ENST00000533733 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 DENND4CQ5VZ89 1909 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 SCN8AQ9UQD0 1980 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 EIF4E1BA6NMX2 242 aaKnown RBP11.88□□□□□ -0.51
ATM-222ENST00000533733 E5RI56 91 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 CBX4O00257 560 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 KIF3CO14782 793 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 SOD2P04179 222 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 PCSK2P16519 638 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 CSNK1DP48730 415 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 GPNMBQ14956 572 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 PDCD4Q53EL6 469 aaKnown RBP11.88□□□□□ -0.51
ATM-222ENST00000533733 RNF220Q5VTB9 566 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 RNF219Q5W0B1 726 aaPredicted RBP11.88□□□□□ -0.51
ATM-222ENST00000533733 GALNT13Q8IUC8 556 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 FUNDC1Q8IVP5 155 aa11.88□□□□□ -0.51
ATM-222ENST00000533733 DDIASQ8IXT1 998 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms